Gene : Cucsa.195800 C. sativus v1.0
Defline:  (1 of 2) PTHR31165:SF10 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-RELATED Genomic Order:  19
Name:  ? Cucsa.195800 Secondary Identifier:  ? PAC:16968229
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.195800 0.5kb upstream 0.5kb upstream 3724 true scaffold01352: 130623-134346 Cucumis sativus
Cucsa.195800 0.5kb upstream 0.5kb upstream 500 false scaffold01352: 133847-134346 Cucumis sativus
Cucsa.195800 0.5kb downstream 0.5kb downstream 3724 true scaffold01352: 130123-133846 Cucumis sativus
Cucsa.195800 0.5kb downstream 0.5kb downstream 500 false scaffold01352: 130123-130622 Cucumis sativus
Cucsa.195800 1.0kb upstream 1.0kb upstream 4224 true scaffold01352: 130623-134846 Cucumis sativus
Cucsa.195800 1.0kb upstream 1.0kb upstream 1000 false scaffold01352: 133847-134846 Cucumis sativus
Cucsa.195800 1.0kb downstream 1.0kb downstream 4224 true scaffold01352: 129623-133846 Cucumis sativus
Cucsa.195800 1.0kb downstream 1.0kb downstream 1000 false scaffold01352: 129623-130622 Cucumis sativus
Cucsa.195800 2.0kb upstream 2.0kb upstream 5224 true scaffold01352: 130623-135846 Cucumis sativus
Cucsa.195800 2.0kb upstream 2.0kb upstream 2000 false scaffold01352: 133847-135846 Cucumis sativus
Cucsa.195800 2.0kb downstream 2.0kb downstream 5224 true scaffold01352: 128623-133846 Cucumis sativus
Cucsa.195800 2.0kb downstream 2.0kb downstream 2000 false scaffold01352: 128623-130622 Cucumis sativus
Cucsa.195800 5.0kb upstream 5.0kb upstream 8224 true scaffold01352: 130623-138846 Cucumis sativus
Cucsa.195800 5.0kb upstream 5.0kb upstream 5000 false scaffold01352: 133847-138846 Cucumis sativus
Cucsa.195800 5.0kb downstream 5.0kb downstream 8224 true scaffold01352: 125623-133846 Cucumis sativus
Cucsa.195800 5.0kb downstream 5.0kb downstream 5000 false scaffold01352: 125623-130622 Cucumis sativus
Cucsa.195800 10.0kb upstream 10.0kb upstream 9111 true scaffold01352: 130623-139733 Cucumis sativus
Cucsa.195800 10.0kb upstream 10.0kb upstream 5887 false scaffold01352: 133847-139733 Cucumis sativus
Cucsa.195800 10.0kb downstream 10.0kb downstream 13224 true scaffold01352: 120623-133846 Cucumis sativus
Cucsa.195800 10.0kb downstream 10.0kb downstream 10000 false scaffold01352: 120623-130622 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792183 5273 Angiosperm View MSA
122309730 5265 Fabidae View MSA
124064953 5270 Rosid View MSA
123750207 5271 Pentapetalae View MSA
122796804 5272 Eudicot View MSA
121063429 5274 Embryophyte View MSA
123103178 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain