Gene : Cucsa.197270 C. sativus v1.0
Defline:  (1 of 2) PTHR11877//PTHR11877:SF25 - HYDROXYMETHYLGLUTARYL-COA SYNTHASE Genomic Order:  106
Name:  ? Cucsa.197270 Secondary Identifier:  ? PAC:16968399
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.197270 0.5kb upstream 0.5kb upstream 1938 true scaffold01357: 720632-722569 Cucumis sativus
Cucsa.197270 0.5kb upstream 0.5kb upstream 500 false scaffold01357: 720632-721131 Cucumis sativus
Cucsa.197270 0.5kb downstream 0.5kb downstream 1938 true scaffold01357: 721132-723069 Cucumis sativus
Cucsa.197270 0.5kb downstream 0.5kb downstream 500 false scaffold01357: 722570-723069 Cucumis sativus
Cucsa.197270 1.0kb upstream 1.0kb upstream 2438 true scaffold01357: 720132-722569 Cucumis sativus
Cucsa.197270 1.0kb upstream 1.0kb upstream 1000 false scaffold01357: 720132-721131 Cucumis sativus
Cucsa.197270 1.0kb downstream 1.0kb downstream 2438 true scaffold01357: 721132-723569 Cucumis sativus
Cucsa.197270 1.0kb downstream 1.0kb downstream 1000 false scaffold01357: 722570-723569 Cucumis sativus
Cucsa.197270 2.0kb upstream 2.0kb upstream 3438 true scaffold01357: 719132-722569 Cucumis sativus
Cucsa.197270 2.0kb upstream 2.0kb upstream 2000 false scaffold01357: 719132-721131 Cucumis sativus
Cucsa.197270 2.0kb downstream 2.0kb downstream 3438 true scaffold01357: 721132-724569 Cucumis sativus
Cucsa.197270 2.0kb downstream 2.0kb downstream 2000 false scaffold01357: 722570-724569 Cucumis sativus
Cucsa.197270 5.0kb upstream 5.0kb upstream 6438 true scaffold01357: 716132-722569 Cucumis sativus
Cucsa.197270 5.0kb upstream 5.0kb upstream 5000 false scaffold01357: 716132-721131 Cucumis sativus
Cucsa.197270 5.0kb downstream 5.0kb downstream 6438 true scaffold01357: 721132-727569 Cucumis sativus
Cucsa.197270 5.0kb downstream 5.0kb downstream 5000 false scaffold01357: 722570-727569 Cucumis sativus
Cucsa.197270 10.0kb upstream 10.0kb upstream 11438 true scaffold01357: 711132-722569 Cucumis sativus
Cucsa.197270 10.0kb upstream 10.0kb upstream 10000 false scaffold01357: 711132-721131 Cucumis sativus
Cucsa.197270 10.0kb downstream 10.0kb downstream 11438 true scaffold01357: 721132-732569 Cucumis sativus
Cucsa.197270 10.0kb downstream 10.0kb downstream 10000 false scaffold01357: 722570-732569 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300331 5265 Fabidae View MSA
124063959 5270 Rosid View MSA
123736714 5271 Pentapetalae View MSA
122788702 5272 Eudicot View MSA
122042999 5273 Angiosperm View MSA
121348952 5274 Embryophyte View MSA
123428386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain