Gene : Cucsa.197540 C. sativus v1.0
Defline:  (1 of 1) 5.4.4.2 - Isochorismate synthase / Isochorismate synthetase Genomic Order:  133
Name:  ? Cucsa.197540 Secondary Identifier:  ? PAC:16968444
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-5837 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.197540 0.5kb upstream 0.5kb upstream 7013 true scaffold01357: 903444-910456 Cucumis sativus
Cucsa.197540 0.5kb upstream 0.5kb upstream 500 false scaffold01357: 909957-910456 Cucumis sativus
Cucsa.197540 0.5kb downstream 0.5kb downstream 7013 true scaffold01357: 902944-909956 Cucumis sativus
Cucsa.197540 0.5kb downstream 0.5kb downstream 500 false scaffold01357: 902944-903443 Cucumis sativus
Cucsa.197540 1.0kb upstream 1.0kb upstream 7513 true scaffold01357: 903444-910956 Cucumis sativus
Cucsa.197540 1.0kb upstream 1.0kb upstream 1000 false scaffold01357: 909957-910956 Cucumis sativus
Cucsa.197540 1.0kb downstream 1.0kb downstream 7513 true scaffold01357: 902444-909956 Cucumis sativus
Cucsa.197540 1.0kb downstream 1.0kb downstream 1000 false scaffold01357: 902444-903443 Cucumis sativus
Cucsa.197540 2.0kb upstream 2.0kb upstream 8513 true scaffold01357: 903444-911956 Cucumis sativus
Cucsa.197540 2.0kb upstream 2.0kb upstream 2000 false scaffold01357: 909957-911956 Cucumis sativus
Cucsa.197540 2.0kb downstream 2.0kb downstream 8513 true scaffold01357: 901444-909956 Cucumis sativus
Cucsa.197540 2.0kb downstream 2.0kb downstream 2000 false scaffold01357: 901444-903443 Cucumis sativus
Cucsa.197540 5.0kb upstream 5.0kb upstream 11513 true scaffold01357: 903444-914956 Cucumis sativus
Cucsa.197540 5.0kb upstream 5.0kb upstream 5000 false scaffold01357: 909957-914956 Cucumis sativus
Cucsa.197540 5.0kb downstream 5.0kb downstream 11513 true scaffold01357: 898444-909956 Cucumis sativus
Cucsa.197540 5.0kb downstream 5.0kb downstream 5000 false scaffold01357: 898444-903443 Cucumis sativus
Cucsa.197540 10.0kb upstream 10.0kb upstream 16513 true scaffold01357: 903444-919956 Cucumis sativus
Cucsa.197540 10.0kb upstream 10.0kb upstream 10000 false scaffold01357: 909957-919956 Cucumis sativus
Cucsa.197540 10.0kb downstream 10.0kb downstream 16513 true scaffold01357: 893444-909956 Cucumis sativus
Cucsa.197540 10.0kb downstream 10.0kb downstream 10000 false scaffold01357: 893444-903443 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306952 5265 Fabidae View MSA
124062909 5270 Rosid View MSA
123737646 5271 Pentapetalae View MSA
122790001 5272 Eudicot View MSA
122045851 5273 Angiosperm View MSA
121310517 5274 Embryophyte View MSA
123347980 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain