Gene : Cucsa.197730 C. sativus v1.0
Defline:  (1 of 2) 1.3.1.83 - Geranylgeranyl diphosphate reductase / Geranylgeranyl reductase Genomic Order:  152
Name:  ? Cucsa.197730 Secondary Identifier:  ? PAC:16968488
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-5063 Cucumis sativus pathologic  
Csativus PWY-5064 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.197730 0.5kb upstream 0.5kb upstream 2257 true scaffold01357: 1015842-1018098 Cucumis sativus
Cucsa.197730 0.5kb upstream 0.5kb upstream 500 false scaffold01357: 1017599-1018098 Cucumis sativus
Cucsa.197730 0.5kb downstream 0.5kb downstream 2257 true scaffold01357: 1015342-1017598 Cucumis sativus
Cucsa.197730 0.5kb downstream 0.5kb downstream 500 false scaffold01357: 1015342-1015841 Cucumis sativus
Cucsa.197730 1.0kb upstream 1.0kb upstream 2757 true scaffold01357: 1015842-1018598 Cucumis sativus
Cucsa.197730 1.0kb upstream 1.0kb upstream 1000 false scaffold01357: 1017599-1018598 Cucumis sativus
Cucsa.197730 1.0kb downstream 1.0kb downstream 2757 true scaffold01357: 1014842-1017598 Cucumis sativus
Cucsa.197730 1.0kb downstream 1.0kb downstream 1000 false scaffold01357: 1014842-1015841 Cucumis sativus
Cucsa.197730 2.0kb upstream 2.0kb upstream 3757 true scaffold01357: 1015842-1019598 Cucumis sativus
Cucsa.197730 2.0kb upstream 2.0kb upstream 2000 false scaffold01357: 1017599-1019598 Cucumis sativus
Cucsa.197730 2.0kb downstream 2.0kb downstream 3757 true scaffold01357: 1013842-1017598 Cucumis sativus
Cucsa.197730 2.0kb downstream 2.0kb downstream 2000 false scaffold01357: 1013842-1015841 Cucumis sativus
Cucsa.197730 5.0kb upstream 5.0kb upstream 6757 true scaffold01357: 1015842-1022598 Cucumis sativus
Cucsa.197730 5.0kb upstream 5.0kb upstream 5000 false scaffold01357: 1017599-1022598 Cucumis sativus
Cucsa.197730 5.0kb downstream 5.0kb downstream 6757 true scaffold01357: 1010842-1017598 Cucumis sativus
Cucsa.197730 5.0kb downstream 5.0kb downstream 5000 false scaffold01357: 1010842-1015841 Cucumis sativus
Cucsa.197730 10.0kb upstream 10.0kb upstream 11757 true scaffold01357: 1015842-1027598 Cucumis sativus
Cucsa.197730 10.0kb upstream 10.0kb upstream 10000 false scaffold01357: 1017599-1027598 Cucumis sativus
Cucsa.197730 10.0kb downstream 10.0kb downstream 11757 true scaffold01357: 1005842-1017598 Cucumis sativus
Cucsa.197730 10.0kb downstream 10.0kb downstream 10000 false scaffold01357: 1005842-1015841 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305502 5265 Fabidae View MSA
124070478 5270 Rosid View MSA
123742493 5271 Pentapetalae View MSA
122794040 5272 Eudicot View MSA
122041542 5273 Angiosperm View MSA
121345615 5274 Embryophyte View MSA
123424772 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain