Gene : Cucsa.198490 C. sativus v1.0
Defline:  (1 of 74) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  228
Name:  ? Cucsa.198490 Secondary Identifier:  ? PAC:16968600
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.198490 0.5kb upstream 0.5kb upstream 3373 true scaffold01357: 1511244-1514616 Cucumis sativus
Cucsa.198490 0.5kb upstream 0.5kb upstream 500 false scaffold01357: 1511244-1511743 Cucumis sativus
Cucsa.198490 0.5kb downstream 0.5kb downstream 3373 true scaffold01357: 1511744-1515116 Cucumis sativus
Cucsa.198490 0.5kb downstream 0.5kb downstream 500 false scaffold01357: 1514617-1515116 Cucumis sativus
Cucsa.198490 1.0kb upstream 1.0kb upstream 3873 true scaffold01357: 1510744-1514616 Cucumis sativus
Cucsa.198490 1.0kb upstream 1.0kb upstream 1000 false scaffold01357: 1510744-1511743 Cucumis sativus
Cucsa.198490 1.0kb downstream 1.0kb downstream 3873 true scaffold01357: 1511744-1515616 Cucumis sativus
Cucsa.198490 1.0kb downstream 1.0kb downstream 1000 false scaffold01357: 1514617-1515616 Cucumis sativus
Cucsa.198490 2.0kb upstream 2.0kb upstream 4873 true scaffold01357: 1509744-1514616 Cucumis sativus
Cucsa.198490 2.0kb upstream 2.0kb upstream 2000 false scaffold01357: 1509744-1511743 Cucumis sativus
Cucsa.198490 2.0kb downstream 2.0kb downstream 4873 true scaffold01357: 1511744-1516616 Cucumis sativus
Cucsa.198490 2.0kb downstream 2.0kb downstream 2000 false scaffold01357: 1514617-1516616 Cucumis sativus
Cucsa.198490 5.0kb upstream 5.0kb upstream 7873 true scaffold01357: 1506744-1514616 Cucumis sativus
Cucsa.198490 5.0kb upstream 5.0kb upstream 5000 false scaffold01357: 1506744-1511743 Cucumis sativus
Cucsa.198490 5.0kb downstream 5.0kb downstream 7873 true scaffold01357: 1511744-1519616 Cucumis sativus
Cucsa.198490 5.0kb downstream 5.0kb downstream 5000 false scaffold01357: 1514617-1519616 Cucumis sativus
Cucsa.198490 10.0kb upstream 10.0kb upstream 12873 true scaffold01357: 1501744-1514616 Cucumis sativus
Cucsa.198490 10.0kb upstream 10.0kb upstream 10000 false scaffold01357: 1501744-1511743 Cucumis sativus
Cucsa.198490 10.0kb downstream 10.0kb downstream 12873 true scaffold01357: 1511744-1524616 Cucumis sativus
Cucsa.198490 10.0kb downstream 10.0kb downstream 10000 false scaffold01357: 1514617-1524616 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302448 5265 Fabidae View MSA
124074740 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain