Gene : Cucsa.200400 C. sativus v1.0
Defline:  (1 of 3) PTHR21266:SF24 - PHEOPHORBIDE A OXYGENASE, CHLOROPLASTIC Genomic Order:  69
Name:  ? Cucsa.200400 Secondary Identifier:  ? PAC:16968782
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-5098 Cucumis sativus pathologic  
Csativus PWY-6927 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.200400 0.5kb upstream 0.5kb upstream 3149 true scaffold01365: 885232-888380 Cucumis sativus
Cucsa.200400 0.5kb upstream 0.5kb upstream 500 false scaffold01365: 885232-885731 Cucumis sativus
Cucsa.200400 0.5kb downstream 0.5kb downstream 3149 true scaffold01365: 885732-888880 Cucumis sativus
Cucsa.200400 0.5kb downstream 0.5kb downstream 500 false scaffold01365: 888381-888880 Cucumis sativus
Cucsa.200400 1.0kb upstream 1.0kb upstream 3649 true scaffold01365: 884732-888380 Cucumis sativus
Cucsa.200400 1.0kb upstream 1.0kb upstream 1000 false scaffold01365: 884732-885731 Cucumis sativus
Cucsa.200400 1.0kb downstream 1.0kb downstream 3649 true scaffold01365: 885732-889380 Cucumis sativus
Cucsa.200400 1.0kb downstream 1.0kb downstream 1000 false scaffold01365: 888381-889380 Cucumis sativus
Cucsa.200400 2.0kb upstream 2.0kb upstream 4649 true scaffold01365: 883732-888380 Cucumis sativus
Cucsa.200400 2.0kb upstream 2.0kb upstream 2000 false scaffold01365: 883732-885731 Cucumis sativus
Cucsa.200400 2.0kb downstream 2.0kb downstream 4649 true scaffold01365: 885732-890380 Cucumis sativus
Cucsa.200400 2.0kb downstream 2.0kb downstream 2000 false scaffold01365: 888381-890380 Cucumis sativus
Cucsa.200400 5.0kb upstream 5.0kb upstream 7649 true scaffold01365: 880732-888380 Cucumis sativus
Cucsa.200400 5.0kb upstream 5.0kb upstream 5000 false scaffold01365: 880732-885731 Cucumis sativus
Cucsa.200400 5.0kb downstream 5.0kb downstream 7649 true scaffold01365: 885732-893380 Cucumis sativus
Cucsa.200400 5.0kb downstream 5.0kb downstream 5000 false scaffold01365: 888381-893380 Cucumis sativus
Cucsa.200400 10.0kb upstream 10.0kb upstream 12649 true scaffold01365: 875732-888380 Cucumis sativus
Cucsa.200400 10.0kb upstream 10.0kb upstream 10000 false scaffold01365: 875732-885731 Cucumis sativus
Cucsa.200400 10.0kb downstream 10.0kb downstream 12649 true scaffold01365: 885732-898380 Cucumis sativus
Cucsa.200400 10.0kb downstream 10.0kb downstream 10000 false scaffold01365: 888381-898380 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121604029 5273 Angiosperm Singleton cluster - no MSA
122234280 5265 Fabidae Singleton cluster - no MSA
123980504 5270 Rosid Singleton cluster - no MSA
123556181 5271 Pentapetalae Singleton cluster - no MSA
122590995 5272 Eudicot Singleton cluster - no MSA
120876319 5274 Embryophyte Singleton cluster - no MSA
122917210 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain