Gene : Cucsa.201230 C. sativus v1.0
Defline:  (1 of 3) PTHR14363//PTHR14363:SF13 - HEPARANASE-RELATED Genomic Order:  18
Name:  ? Cucsa.201230 Secondary Identifier:  ? PAC:16968822
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7213 Cucumis sativus pathologic  
Csativus PWY-7214 Cucumis sativus pathologic  
Csativus PWY-7445 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.201230 0.5kb upstream 0.5kb upstream 3005 true scaffold01374: 160503-163507 Cucumis sativus
Cucsa.201230 0.5kb upstream 0.5kb upstream 500 false scaffold01374: 163008-163507 Cucumis sativus
Cucsa.201230 0.5kb downstream 0.5kb downstream 3005 true scaffold01374: 160003-163007 Cucumis sativus
Cucsa.201230 0.5kb downstream 0.5kb downstream 500 false scaffold01374: 160003-160502 Cucumis sativus
Cucsa.201230 1.0kb upstream 1.0kb upstream 3505 true scaffold01374: 160503-164007 Cucumis sativus
Cucsa.201230 1.0kb upstream 1.0kb upstream 1000 false scaffold01374: 163008-164007 Cucumis sativus
Cucsa.201230 1.0kb downstream 1.0kb downstream 3505 true scaffold01374: 159503-163007 Cucumis sativus
Cucsa.201230 1.0kb downstream 1.0kb downstream 1000 false scaffold01374: 159503-160502 Cucumis sativus
Cucsa.201230 2.0kb upstream 2.0kb upstream 4505 true scaffold01374: 160503-165007 Cucumis sativus
Cucsa.201230 2.0kb upstream 2.0kb upstream 2000 false scaffold01374: 163008-165007 Cucumis sativus
Cucsa.201230 2.0kb downstream 2.0kb downstream 4505 true scaffold01374: 158503-163007 Cucumis sativus
Cucsa.201230 2.0kb downstream 2.0kb downstream 2000 false scaffold01374: 158503-160502 Cucumis sativus
Cucsa.201230 5.0kb upstream 5.0kb upstream 7505 true scaffold01374: 160503-168007 Cucumis sativus
Cucsa.201230 5.0kb upstream 5.0kb upstream 5000 false scaffold01374: 163008-168007 Cucumis sativus
Cucsa.201230 5.0kb downstream 5.0kb downstream 7505 true scaffold01374: 155503-163007 Cucumis sativus
Cucsa.201230 5.0kb downstream 5.0kb downstream 5000 false scaffold01374: 155503-160502 Cucumis sativus
Cucsa.201230 10.0kb upstream 10.0kb upstream 12505 true scaffold01374: 160503-173007 Cucumis sativus
Cucsa.201230 10.0kb upstream 10.0kb upstream 10000 false scaffold01374: 163008-173007 Cucumis sativus
Cucsa.201230 10.0kb downstream 10.0kb downstream 12505 true scaffold01374: 150503-163007 Cucumis sativus
Cucsa.201230 10.0kb downstream 10.0kb downstream 10000 false scaffold01374: 150503-160502 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121606495 5273 Angiosperm View MSA
122236765 5265 Fabidae View MSA
123982975 5270 Rosid View MSA
123558649 5271 Pentapetalae View MSA
122593463 5272 Eudicot View MSA
120878785 5274 Embryophyte View MSA
122919674 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain