Gene : Cucsa.202020 C. sativus v1.0
Defline:  (1 of 1) PTHR23076:SF40 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 11, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  31
Name:  ? Cucsa.202020 Secondary Identifier:  ? PAC:16968921
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.202020 0.5kb upstream 0.5kb upstream 9249 true scaffold01376: 174882-184130 Cucumis sativus
Cucsa.202020 0.5kb upstream 0.5kb upstream 500 false scaffold01376: 174882-175381 Cucumis sativus
Cucsa.202020 0.5kb downstream 0.5kb downstream 9249 true scaffold01376: 175382-184630 Cucumis sativus
Cucsa.202020 0.5kb downstream 0.5kb downstream 500 false scaffold01376: 184131-184630 Cucumis sativus
Cucsa.202020 1.0kb upstream 1.0kb upstream 9749 true scaffold01376: 174382-184130 Cucumis sativus
Cucsa.202020 1.0kb upstream 1.0kb upstream 1000 false scaffold01376: 174382-175381 Cucumis sativus
Cucsa.202020 1.0kb downstream 1.0kb downstream 9749 true scaffold01376: 175382-185130 Cucumis sativus
Cucsa.202020 1.0kb downstream 1.0kb downstream 1000 false scaffold01376: 184131-185130 Cucumis sativus
Cucsa.202020 2.0kb upstream 2.0kb upstream 10749 true scaffold01376: 173382-184130 Cucumis sativus
Cucsa.202020 2.0kb upstream 2.0kb upstream 2000 false scaffold01376: 173382-175381 Cucumis sativus
Cucsa.202020 2.0kb downstream 2.0kb downstream 10749 true scaffold01376: 175382-186130 Cucumis sativus
Cucsa.202020 2.0kb downstream 2.0kb downstream 2000 false scaffold01376: 184131-186130 Cucumis sativus
Cucsa.202020 5.0kb upstream 5.0kb upstream 13749 true scaffold01376: 170382-184130 Cucumis sativus
Cucsa.202020 5.0kb upstream 5.0kb upstream 5000 false scaffold01376: 170382-175381 Cucumis sativus
Cucsa.202020 5.0kb downstream 5.0kb downstream 13749 true scaffold01376: 175382-189130 Cucumis sativus
Cucsa.202020 5.0kb downstream 5.0kb downstream 5000 false scaffold01376: 184131-189130 Cucumis sativus
Cucsa.202020 10.0kb upstream 10.0kb upstream 18749 true scaffold01376: 165382-184130 Cucumis sativus
Cucsa.202020 10.0kb upstream 10.0kb upstream 10000 false scaffold01376: 165382-175381 Cucumis sativus
Cucsa.202020 10.0kb downstream 10.0kb downstream 18749 true scaffold01376: 175382-194130 Cucumis sativus
Cucsa.202020 10.0kb downstream 10.0kb downstream 10000 false scaffold01376: 184131-194130 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299271 5265 Fabidae View MSA
124073797 5270 Rosid View MSA
123744222 5271 Pentapetalae View MSA
122793624 5272 Eudicot View MSA
122043793 5273 Angiosperm View MSA
121346284 5274 Embryophyte View MSA
123428638 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain