Gene : Cucsa.205070 C. sativus v1.0
Defline:  (1 of 1) PTHR11361:SF89 - DNA MISMATCH REPAIR PROTEIN MSH6 Genomic Order:  25
Name:  ? Cucsa.205070 Secondary Identifier:  ? PAC:16969051
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.205070 0.5kb upstream 0.5kb upstream 9253 true scaffold01416: 186987-196239 Cucumis sativus
Cucsa.205070 0.5kb upstream 0.5kb upstream 500 false scaffold01416: 186987-187486 Cucumis sativus
Cucsa.205070 0.5kb downstream 0.5kb downstream 9253 true scaffold01416: 187487-196739 Cucumis sativus
Cucsa.205070 0.5kb downstream 0.5kb downstream 500 false scaffold01416: 196240-196739 Cucumis sativus
Cucsa.205070 1.0kb upstream 1.0kb upstream 9753 true scaffold01416: 186487-196239 Cucumis sativus
Cucsa.205070 1.0kb upstream 1.0kb upstream 1000 false scaffold01416: 186487-187486 Cucumis sativus
Cucsa.205070 1.0kb downstream 1.0kb downstream 9753 true scaffold01416: 187487-197239 Cucumis sativus
Cucsa.205070 1.0kb downstream 1.0kb downstream 1000 false scaffold01416: 196240-197239 Cucumis sativus
Cucsa.205070 2.0kb upstream 2.0kb upstream 10753 true scaffold01416: 185487-196239 Cucumis sativus
Cucsa.205070 2.0kb upstream 2.0kb upstream 2000 false scaffold01416: 185487-187486 Cucumis sativus
Cucsa.205070 2.0kb downstream 2.0kb downstream 10753 true scaffold01416: 187487-198239 Cucumis sativus
Cucsa.205070 2.0kb downstream 2.0kb downstream 2000 false scaffold01416: 196240-198239 Cucumis sativus
Cucsa.205070 5.0kb upstream 5.0kb upstream 13753 true scaffold01416: 182487-196239 Cucumis sativus
Cucsa.205070 5.0kb upstream 5.0kb upstream 5000 false scaffold01416: 182487-187486 Cucumis sativus
Cucsa.205070 5.0kb downstream 5.0kb downstream 13753 true scaffold01416: 187487-201239 Cucumis sativus
Cucsa.205070 5.0kb downstream 5.0kb downstream 5000 false scaffold01416: 196240-201239 Cucumis sativus
Cucsa.205070 10.0kb upstream 10.0kb upstream 18753 true scaffold01416: 177487-196239 Cucumis sativus
Cucsa.205070 10.0kb upstream 10.0kb upstream 10000 false scaffold01416: 177487-187486 Cucumis sativus
Cucsa.205070 10.0kb downstream 10.0kb downstream 18753 true scaffold01416: 187487-206239 Cucumis sativus
Cucsa.205070 10.0kb downstream 10.0kb downstream 10000 false scaffold01416: 196240-206239 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300035 5265 Fabidae View MSA
124062676 5270 Rosid View MSA
123736808 5271 Pentapetalae View MSA
122787445 5272 Eudicot View MSA
122041770 5273 Angiosperm View MSA
121347464 5274 Embryophyte View MSA
123426480 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain