Gene : Cucsa.207340 C. sativus v1.0
Defline:  (1 of 4) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA Genomic Order:  11
Name:  ? Cucsa.207340 Secondary Identifier:  ? PAC:16969224
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.207340 0.5kb upstream 0.5kb upstream 2353 true scaffold01443: 183245-185597 Cucumis sativus
Cucsa.207340 0.5kb upstream 0.5kb upstream 500 false scaffold01443: 185098-185597 Cucumis sativus
Cucsa.207340 0.5kb downstream 0.5kb downstream 2353 true scaffold01443: 182745-185097 Cucumis sativus
Cucsa.207340 0.5kb downstream 0.5kb downstream 500 false scaffold01443: 182745-183244 Cucumis sativus
Cucsa.207340 1.0kb upstream 1.0kb upstream 2853 true scaffold01443: 183245-186097 Cucumis sativus
Cucsa.207340 1.0kb upstream 1.0kb upstream 1000 false scaffold01443: 185098-186097 Cucumis sativus
Cucsa.207340 1.0kb downstream 1.0kb downstream 2853 true scaffold01443: 182245-185097 Cucumis sativus
Cucsa.207340 1.0kb downstream 1.0kb downstream 1000 false scaffold01443: 182245-183244 Cucumis sativus
Cucsa.207340 2.0kb upstream 2.0kb upstream 3853 true scaffold01443: 183245-187097 Cucumis sativus
Cucsa.207340 2.0kb upstream 2.0kb upstream 2000 false scaffold01443: 185098-187097 Cucumis sativus
Cucsa.207340 2.0kb downstream 2.0kb downstream 3853 true scaffold01443: 181245-185097 Cucumis sativus
Cucsa.207340 2.0kb downstream 2.0kb downstream 2000 false scaffold01443: 181245-183244 Cucumis sativus
Cucsa.207340 5.0kb upstream 5.0kb upstream 6853 true scaffold01443: 183245-190097 Cucumis sativus
Cucsa.207340 5.0kb upstream 5.0kb upstream 5000 false scaffold01443: 185098-190097 Cucumis sativus
Cucsa.207340 5.0kb downstream 5.0kb downstream 6853 true scaffold01443: 178245-185097 Cucumis sativus
Cucsa.207340 5.0kb downstream 5.0kb downstream 5000 false scaffold01443: 178245-183244 Cucumis sativus
Cucsa.207340 10.0kb upstream 10.0kb upstream 11853 true scaffold01443: 183245-195097 Cucumis sativus
Cucsa.207340 10.0kb upstream 10.0kb upstream 10000 false scaffold01443: 185098-195097 Cucumis sativus
Cucsa.207340 10.0kb downstream 10.0kb downstream 11853 true scaffold01443: 173245-185097 Cucumis sativus
Cucsa.207340 10.0kb downstream 10.0kb downstream 10000 false scaffold01443: 173245-183244 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121604098 5273 Angiosperm Singleton cluster - no MSA
122234350 5265 Fabidae Singleton cluster - no MSA
123980574 5270 Rosid Singleton cluster - no MSA
123556251 5271 Pentapetalae Singleton cluster - no MSA
122591065 5272 Eudicot Singleton cluster - no MSA
120876388 5274 Embryophyte Singleton cluster - no MSA
122917279 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain