Gene : Cucsa.207620 C. sativus v1.0
Defline:  (1 of 1) PTHR11879//PTHR11879:SF18 - ASPARTATE AMINOTRANSFERASE Genomic Order:  39
Name:  ? Cucsa.207620 Secondary Identifier:  ? PAC:16969259
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus ASPARTATE-DEG1-PWY Cucumis sativus pathologic  
Csativus ASPARTATESYN-PWY Cucumis sativus pathologic  
Csativus PWY-3001 Cucumis sativus pathologic  
Csativus PWY-7115 Cucumis sativus pathologic  
Csativus PWY-7117 Cucumis sativus pathologic  
Csativus THRESYN-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.207620 0.5kb upstream 0.5kb upstream 5127 true scaffold01443: 399298-404424 Cucumis sativus
Cucsa.207620 0.5kb upstream 0.5kb upstream 500 false scaffold01443: 399298-399797 Cucumis sativus
Cucsa.207620 0.5kb downstream 0.5kb downstream 5127 true scaffold01443: 399798-404924 Cucumis sativus
Cucsa.207620 0.5kb downstream 0.5kb downstream 500 false scaffold01443: 404425-404924 Cucumis sativus
Cucsa.207620 1.0kb upstream 1.0kb upstream 5627 true scaffold01443: 398798-404424 Cucumis sativus
Cucsa.207620 1.0kb upstream 1.0kb upstream 1000 false scaffold01443: 398798-399797 Cucumis sativus
Cucsa.207620 1.0kb downstream 1.0kb downstream 5627 true scaffold01443: 399798-405424 Cucumis sativus
Cucsa.207620 1.0kb downstream 1.0kb downstream 1000 false scaffold01443: 404425-405424 Cucumis sativus
Cucsa.207620 2.0kb upstream 2.0kb upstream 6627 true scaffold01443: 397798-404424 Cucumis sativus
Cucsa.207620 2.0kb upstream 2.0kb upstream 2000 false scaffold01443: 397798-399797 Cucumis sativus
Cucsa.207620 2.0kb downstream 2.0kb downstream 6627 true scaffold01443: 399798-406424 Cucumis sativus
Cucsa.207620 2.0kb downstream 2.0kb downstream 2000 false scaffold01443: 404425-406424 Cucumis sativus
Cucsa.207620 5.0kb upstream 5.0kb upstream 9627 true scaffold01443: 394798-404424 Cucumis sativus
Cucsa.207620 5.0kb upstream 5.0kb upstream 5000 false scaffold01443: 394798-399797 Cucumis sativus
Cucsa.207620 5.0kb downstream 5.0kb downstream 9627 true scaffold01443: 399798-409424 Cucumis sativus
Cucsa.207620 5.0kb downstream 5.0kb downstream 5000 false scaffold01443: 404425-409424 Cucumis sativus
Cucsa.207620 10.0kb upstream 10.0kb upstream 14627 true scaffold01443: 389798-404424 Cucumis sativus
Cucsa.207620 10.0kb upstream 10.0kb upstream 10000 false scaffold01443: 389798-399797 Cucumis sativus
Cucsa.207620 10.0kb downstream 10.0kb downstream 14627 true scaffold01443: 399798-414424 Cucumis sativus
Cucsa.207620 10.0kb downstream 10.0kb downstream 10000 false scaffold01443: 404425-414424 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301166 5265 Fabidae View MSA
124063482 5270 Rosid View MSA
123737145 5271 Pentapetalae View MSA
122793092 5272 Eudicot View MSA
122046072 5273 Angiosperm View MSA
121344214 5274 Embryophyte View MSA
123424622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain