Gene : Cucsa.219140 C. sativus v1.0
Defline:  (1 of 1) PTHR30544//PTHR30544:SF2 - 23S RRNA METHYLTRANSFERASE Genomic Order:  142
Name:  ? Cucsa.219140 Secondary Identifier:  ? PAC:16969766
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.219140 0.5kb upstream 0.5kb upstream 4835 true scaffold01658: 1010878-1015712 Cucumis sativus
Cucsa.219140 0.5kb upstream 0.5kb upstream 500 false scaffold01658: 1015213-1015712 Cucumis sativus
Cucsa.219140 0.5kb downstream 0.5kb downstream 4835 true scaffold01658: 1010378-1015212 Cucumis sativus
Cucsa.219140 0.5kb downstream 0.5kb downstream 500 false scaffold01658: 1010378-1010877 Cucumis sativus
Cucsa.219140 1.0kb upstream 1.0kb upstream 5335 true scaffold01658: 1010878-1016212 Cucumis sativus
Cucsa.219140 1.0kb upstream 1.0kb upstream 1000 false scaffold01658: 1015213-1016212 Cucumis sativus
Cucsa.219140 1.0kb downstream 1.0kb downstream 5335 true scaffold01658: 1009878-1015212 Cucumis sativus
Cucsa.219140 1.0kb downstream 1.0kb downstream 1000 false scaffold01658: 1009878-1010877 Cucumis sativus
Cucsa.219140 2.0kb upstream 2.0kb upstream 6335 true scaffold01658: 1010878-1017212 Cucumis sativus
Cucsa.219140 2.0kb upstream 2.0kb upstream 2000 false scaffold01658: 1015213-1017212 Cucumis sativus
Cucsa.219140 2.0kb downstream 2.0kb downstream 6335 true scaffold01658: 1008878-1015212 Cucumis sativus
Cucsa.219140 2.0kb downstream 2.0kb downstream 2000 false scaffold01658: 1008878-1010877 Cucumis sativus
Cucsa.219140 5.0kb upstream 5.0kb upstream 9335 true scaffold01658: 1010878-1020212 Cucumis sativus
Cucsa.219140 5.0kb upstream 5.0kb upstream 5000 false scaffold01658: 1015213-1020212 Cucumis sativus
Cucsa.219140 5.0kb downstream 5.0kb downstream 9335 true scaffold01658: 1005878-1015212 Cucumis sativus
Cucsa.219140 5.0kb downstream 5.0kb downstream 5000 false scaffold01658: 1005878-1010877 Cucumis sativus
Cucsa.219140 10.0kb upstream 10.0kb upstream 14335 true scaffold01658: 1010878-1025212 Cucumis sativus
Cucsa.219140 10.0kb upstream 10.0kb upstream 10000 false scaffold01658: 1015213-1025212 Cucumis sativus
Cucsa.219140 10.0kb downstream 10.0kb downstream 14335 true scaffold01658: 1000878-1015212 Cucumis sativus
Cucsa.219140 10.0kb downstream 10.0kb downstream 10000 false scaffold01658: 1000878-1010877 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301797 5265 Fabidae View MSA
124068873 5270 Rosid View MSA
123737735 5271 Pentapetalae View MSA
122788749 5272 Eudicot View MSA
122042435 5273 Angiosperm View MSA
123429187 5275 Viridiplantae View MSA
121346752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain