Gene : Cucsa.222820 C. sativus v1.0
Defline:  (1 of 1) PTHR11879:SF11 - ASPARTATE AMINOTRANSFERASE Genomic Order:  1
Name:  ? Cucsa.222820 Secondary Identifier:  ? PAC:16969960
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-5864 Cucumis sativus pathologic  
Csativus PWY-5886 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.222820 0.5kb upstream 0.5kb upstream 473 true scaffold01747: 1-473 Cucumis sativus
Cucsa.222820 0.5kb upstream 0.5kb upstream 28 false scaffold01747: 1-28 Cucumis sativus
Cucsa.222820 0.5kb downstream 0.5kb downstream 482 true scaffold01747: 29-510 Cucumis sativus
Cucsa.222820 0.5kb downstream 0.5kb downstream 37 false scaffold01747: 474-510 Cucumis sativus
Cucsa.222820 1.0kb upstream 1.0kb upstream 473 true scaffold01747: 1-473 Cucumis sativus
Cucsa.222820 1.0kb upstream 1.0kb upstream 28 false scaffold01747: 1-28 Cucumis sativus
Cucsa.222820 1.0kb downstream 1.0kb downstream 482 true scaffold01747: 29-510 Cucumis sativus
Cucsa.222820 1.0kb downstream 1.0kb downstream 37 false scaffold01747: 474-510 Cucumis sativus
Cucsa.222820 2.0kb upstream 2.0kb upstream 473 true scaffold01747: 1-473 Cucumis sativus
Cucsa.222820 2.0kb upstream 2.0kb upstream 28 false scaffold01747: 1-28 Cucumis sativus
Cucsa.222820 2.0kb downstream 2.0kb downstream 482 true scaffold01747: 29-510 Cucumis sativus
Cucsa.222820 2.0kb downstream 2.0kb downstream 37 false scaffold01747: 474-510 Cucumis sativus
Cucsa.222820 5.0kb upstream 5.0kb upstream 473 true scaffold01747: 1-473 Cucumis sativus
Cucsa.222820 5.0kb upstream 5.0kb upstream 28 false scaffold01747: 1-28 Cucumis sativus
Cucsa.222820 5.0kb downstream 5.0kb downstream 482 true scaffold01747: 29-510 Cucumis sativus
Cucsa.222820 5.0kb downstream 5.0kb downstream 37 false scaffold01747: 474-510 Cucumis sativus
Cucsa.222820 10.0kb upstream 10.0kb upstream 473 true scaffold01747: 1-473 Cucumis sativus
Cucsa.222820 10.0kb upstream 10.0kb upstream 28 false scaffold01747: 1-28 Cucumis sativus
Cucsa.222820 10.0kb downstream 10.0kb downstream 482 true scaffold01747: 29-510 Cucumis sativus
Cucsa.222820 10.0kb downstream 10.0kb downstream 37 false scaffold01747: 474-510 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121606586 5273 Angiosperm View MSA
122236856 5265 Fabidae View MSA
123983066 5270 Rosid View MSA
123558740 5271 Pentapetalae View MSA
122593554 5272 Eudicot View MSA
120878876 5274 Embryophyte View MSA
122919765 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain