Gene : Cucsa.228220 C. sativus v1.0
Defline:  (1 of 1) PF08642 - Histone deacetylation protein Rxt3 (Rxt3) Genomic Order:  20
Name:  ? Cucsa.228220 Secondary Identifier:  ? PAC:16970039
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.228220 0.5kb upstream 0.5kb upstream 10152 true scaffold01933: 174813-184964 Cucumis sativus
Cucsa.228220 0.5kb upstream 0.5kb upstream 500 false scaffold01933: 184465-184964 Cucumis sativus
Cucsa.228220 0.5kb downstream 0.5kb downstream 10152 true scaffold01933: 174313-184464 Cucumis sativus
Cucsa.228220 0.5kb downstream 0.5kb downstream 500 false scaffold01933: 174313-174812 Cucumis sativus
Cucsa.228220 1.0kb upstream 1.0kb upstream 10652 true scaffold01933: 174813-185464 Cucumis sativus
Cucsa.228220 1.0kb upstream 1.0kb upstream 1000 false scaffold01933: 184465-185464 Cucumis sativus
Cucsa.228220 1.0kb downstream 1.0kb downstream 10652 true scaffold01933: 173813-184464 Cucumis sativus
Cucsa.228220 1.0kb downstream 1.0kb downstream 1000 false scaffold01933: 173813-174812 Cucumis sativus
Cucsa.228220 2.0kb upstream 2.0kb upstream 11652 true scaffold01933: 174813-186464 Cucumis sativus
Cucsa.228220 2.0kb upstream 2.0kb upstream 2000 false scaffold01933: 184465-186464 Cucumis sativus
Cucsa.228220 2.0kb downstream 2.0kb downstream 11652 true scaffold01933: 172813-184464 Cucumis sativus
Cucsa.228220 2.0kb downstream 2.0kb downstream 2000 false scaffold01933: 172813-174812 Cucumis sativus
Cucsa.228220 5.0kb upstream 5.0kb upstream 14652 true scaffold01933: 174813-189464 Cucumis sativus
Cucsa.228220 5.0kb upstream 5.0kb upstream 5000 false scaffold01933: 184465-189464 Cucumis sativus
Cucsa.228220 5.0kb downstream 5.0kb downstream 14652 true scaffold01933: 169813-184464 Cucumis sativus
Cucsa.228220 5.0kb downstream 5.0kb downstream 5000 false scaffold01933: 169813-174812 Cucumis sativus
Cucsa.228220 10.0kb upstream 10.0kb upstream 19652 true scaffold01933: 174813-194464 Cucumis sativus
Cucsa.228220 10.0kb upstream 10.0kb upstream 10000 false scaffold01933: 184465-194464 Cucumis sativus
Cucsa.228220 10.0kb downstream 10.0kb downstream 19652 true scaffold01933: 164813-184464 Cucumis sativus
Cucsa.228220 10.0kb downstream 10.0kb downstream 10000 false scaffold01933: 164813-174812 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121604258 5273 Angiosperm Singleton cluster - no MSA
122234511 5265 Fabidae Singleton cluster - no MSA
123980734 5270 Rosid Singleton cluster - no MSA
123556411 5271 Pentapetalae Singleton cluster - no MSA
122591225 5272 Eudicot Singleton cluster - no MSA
120876548 5274 Embryophyte Singleton cluster - no MSA
122917437 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain