Gene : Cucsa.231900 C. sativus v1.0
Defline:  (1 of 1) PTHR21091:SF18 - RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE I Genomic Order:  12
Name:  ? Cucsa.231900 Secondary Identifier:  ? PAC:16970161
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.231900 0.5kb upstream 0.5kb upstream 7431 true scaffold01989: 72573-80003 Cucumis sativus
Cucsa.231900 0.5kb upstream 0.5kb upstream 500 false scaffold01989: 79504-80003 Cucumis sativus
Cucsa.231900 0.5kb downstream 0.5kb downstream 7431 true scaffold01989: 72073-79503 Cucumis sativus
Cucsa.231900 0.5kb downstream 0.5kb downstream 500 false scaffold01989: 72073-72572 Cucumis sativus
Cucsa.231900 1.0kb upstream 1.0kb upstream 7931 true scaffold01989: 72573-80503 Cucumis sativus
Cucsa.231900 1.0kb upstream 1.0kb upstream 1000 false scaffold01989: 79504-80503 Cucumis sativus
Cucsa.231900 1.0kb downstream 1.0kb downstream 7931 true scaffold01989: 71573-79503 Cucumis sativus
Cucsa.231900 1.0kb downstream 1.0kb downstream 1000 false scaffold01989: 71573-72572 Cucumis sativus
Cucsa.231900 2.0kb upstream 2.0kb upstream 8931 true scaffold01989: 72573-81503 Cucumis sativus
Cucsa.231900 2.0kb upstream 2.0kb upstream 2000 false scaffold01989: 79504-81503 Cucumis sativus
Cucsa.231900 2.0kb downstream 2.0kb downstream 8931 true scaffold01989: 70573-79503 Cucumis sativus
Cucsa.231900 2.0kb downstream 2.0kb downstream 2000 false scaffold01989: 70573-72572 Cucumis sativus
Cucsa.231900 5.0kb upstream 5.0kb upstream 11931 true scaffold01989: 72573-84503 Cucumis sativus
Cucsa.231900 5.0kb upstream 5.0kb upstream 5000 false scaffold01989: 79504-84503 Cucumis sativus
Cucsa.231900 5.0kb downstream 5.0kb downstream 11931 true scaffold01989: 67573-79503 Cucumis sativus
Cucsa.231900 5.0kb downstream 5.0kb downstream 5000 false scaffold01989: 67573-72572 Cucumis sativus
Cucsa.231900 10.0kb upstream 10.0kb upstream 16931 true scaffold01989: 72573-89503 Cucumis sativus
Cucsa.231900 10.0kb upstream 10.0kb upstream 10000 false scaffold01989: 79504-89503 Cucumis sativus
Cucsa.231900 10.0kb downstream 10.0kb downstream 16931 true scaffold01989: 62573-79503 Cucumis sativus
Cucsa.231900 10.0kb downstream 10.0kb downstream 10000 false scaffold01989: 62573-72572 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307010 5265 Fabidae View MSA
124062180 5270 Rosid View MSA
123741052 5271 Pentapetalae View MSA
122786797 5272 Eudicot View MSA
122043278 5273 Angiosperm View MSA
121347213 5274 Embryophyte View MSA
123424563 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain