Gene : Cucsa.231860 C. sativus v1.0
Defline:  (1 of 185) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  8
Name:  ? Cucsa.231860 Secondary Identifier:  ? PAC:16970157
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.231860 0.5kb upstream 0.5kb upstream 2522 true scaffold01989: 53227-55748 Cucumis sativus
Cucsa.231860 0.5kb upstream 0.5kb upstream 500 false scaffold01989: 53227-53726 Cucumis sativus
Cucsa.231860 0.5kb downstream 0.5kb downstream 2522 true scaffold01989: 53727-56248 Cucumis sativus
Cucsa.231860 0.5kb downstream 0.5kb downstream 500 false scaffold01989: 55749-56248 Cucumis sativus
Cucsa.231860 1.0kb upstream 1.0kb upstream 3022 true scaffold01989: 52727-55748 Cucumis sativus
Cucsa.231860 1.0kb upstream 1.0kb upstream 1000 false scaffold01989: 52727-53726 Cucumis sativus
Cucsa.231860 1.0kb downstream 1.0kb downstream 3022 true scaffold01989: 53727-56748 Cucumis sativus
Cucsa.231860 1.0kb downstream 1.0kb downstream 1000 false scaffold01989: 55749-56748 Cucumis sativus
Cucsa.231860 2.0kb upstream 2.0kb upstream 4022 true scaffold01989: 51727-55748 Cucumis sativus
Cucsa.231860 2.0kb upstream 2.0kb upstream 2000 false scaffold01989: 51727-53726 Cucumis sativus
Cucsa.231860 2.0kb downstream 2.0kb downstream 4022 true scaffold01989: 53727-57748 Cucumis sativus
Cucsa.231860 2.0kb downstream 2.0kb downstream 2000 false scaffold01989: 55749-57748 Cucumis sativus
Cucsa.231860 5.0kb upstream 5.0kb upstream 7022 true scaffold01989: 48727-55748 Cucumis sativus
Cucsa.231860 5.0kb upstream 5.0kb upstream 5000 false scaffold01989: 48727-53726 Cucumis sativus
Cucsa.231860 5.0kb downstream 5.0kb downstream 7022 true scaffold01989: 53727-60748 Cucumis sativus
Cucsa.231860 5.0kb downstream 5.0kb downstream 5000 false scaffold01989: 55749-60748 Cucumis sativus
Cucsa.231860 10.0kb upstream 10.0kb upstream 12022 true scaffold01989: 43727-55748 Cucumis sativus
Cucsa.231860 10.0kb upstream 10.0kb upstream 10000 false scaffold01989: 43727-53726 Cucumis sativus
Cucsa.231860 10.0kb downstream 10.0kb downstream 12022 true scaffold01989: 53727-65748 Cucumis sativus
Cucsa.231860 10.0kb downstream 10.0kb downstream 10000 false scaffold01989: 55749-65748 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308842 5265 Fabidae View MSA
124074740 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain