Gene : Cucsa.231820 C. sativus v1.0
Defline:  (1 of 141) PF00847 - AP2 domain (AP2) Genomic Order:  4
Name:  ? Cucsa.231820 Secondary Identifier:  ? PAC:16970149
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.231820 0.5kb upstream 0.5kb upstream 1139 true scaffold01989: 28691-29829 Cucumis sativus
Cucsa.231820 0.5kb upstream 0.5kb upstream 500 false scaffold01989: 29330-29829 Cucumis sativus
Cucsa.231820 0.5kb downstream 0.5kb downstream 1139 true scaffold01989: 28191-29329 Cucumis sativus
Cucsa.231820 0.5kb downstream 0.5kb downstream 500 false scaffold01989: 28191-28690 Cucumis sativus
Cucsa.231820 1.0kb upstream 1.0kb upstream 1639 true scaffold01989: 28691-30329 Cucumis sativus
Cucsa.231820 1.0kb upstream 1.0kb upstream 1000 false scaffold01989: 29330-30329 Cucumis sativus
Cucsa.231820 1.0kb downstream 1.0kb downstream 1639 true scaffold01989: 27691-29329 Cucumis sativus
Cucsa.231820 1.0kb downstream 1.0kb downstream 1000 false scaffold01989: 27691-28690 Cucumis sativus
Cucsa.231820 2.0kb upstream 2.0kb upstream 2639 true scaffold01989: 28691-31329 Cucumis sativus
Cucsa.231820 2.0kb upstream 2.0kb upstream 2000 false scaffold01989: 29330-31329 Cucumis sativus
Cucsa.231820 2.0kb downstream 2.0kb downstream 2639 true scaffold01989: 26691-29329 Cucumis sativus
Cucsa.231820 2.0kb downstream 2.0kb downstream 2000 false scaffold01989: 26691-28690 Cucumis sativus
Cucsa.231820 5.0kb upstream 5.0kb upstream 5639 true scaffold01989: 28691-34329 Cucumis sativus
Cucsa.231820 5.0kb upstream 5.0kb upstream 5000 false scaffold01989: 29330-34329 Cucumis sativus
Cucsa.231820 5.0kb downstream 5.0kb downstream 5639 true scaffold01989: 23691-29329 Cucumis sativus
Cucsa.231820 5.0kb downstream 5.0kb downstream 5000 false scaffold01989: 23691-28690 Cucumis sativus
Cucsa.231820 10.0kb upstream 10.0kb upstream 10639 true scaffold01989: 28691-39329 Cucumis sativus
Cucsa.231820 10.0kb upstream 10.0kb upstream 10000 false scaffold01989: 29330-39329 Cucumis sativus
Cucsa.231820 10.0kb downstream 10.0kb downstream 10639 true scaffold01989: 18691-29329 Cucumis sativus
Cucsa.231820 10.0kb downstream 10.0kb downstream 10000 false scaffold01989: 18691-28690 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312723 5265 Fabidae View MSA
124072690 5270 Rosid View MSA
123750816 5271 Pentapetalae View MSA
122794401 5272 Eudicot View MSA
122049756 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121349420 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain