Gene : Cucsa.232780 C. sativus v1.0
Defline:  (1 of 1) PF04571//PF08235 - lipin, N-terminal conserved region (Lipin_N) // LNS2 (Lipin/Ned1/Smp2) (LNS2) Genomic Order:  99
Name:  ? Cucsa.232780 Secondary Identifier:  ? PAC:16970297
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus TRIGLSYN-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.232780 0.5kb upstream 0.5kb upstream 7816 true scaffold01989: 595763-603578 Cucumis sativus
Cucsa.232780 0.5kb upstream 0.5kb upstream 500 false scaffold01989: 595763-596262 Cucumis sativus
Cucsa.232780 0.5kb downstream 0.5kb downstream 7816 true scaffold01989: 596263-604078 Cucumis sativus
Cucsa.232780 0.5kb downstream 0.5kb downstream 500 false scaffold01989: 603579-604078 Cucumis sativus
Cucsa.232780 1.0kb upstream 1.0kb upstream 8316 true scaffold01989: 595263-603578 Cucumis sativus
Cucsa.232780 1.0kb upstream 1.0kb upstream 1000 false scaffold01989: 595263-596262 Cucumis sativus
Cucsa.232780 1.0kb downstream 1.0kb downstream 8316 true scaffold01989: 596263-604578 Cucumis sativus
Cucsa.232780 1.0kb downstream 1.0kb downstream 1000 false scaffold01989: 603579-604578 Cucumis sativus
Cucsa.232780 2.0kb upstream 2.0kb upstream 9316 true scaffold01989: 594263-603578 Cucumis sativus
Cucsa.232780 2.0kb upstream 2.0kb upstream 2000 false scaffold01989: 594263-596262 Cucumis sativus
Cucsa.232780 2.0kb downstream 2.0kb downstream 9316 true scaffold01989: 596263-605578 Cucumis sativus
Cucsa.232780 2.0kb downstream 2.0kb downstream 2000 false scaffold01989: 603579-605578 Cucumis sativus
Cucsa.232780 5.0kb upstream 5.0kb upstream 12316 true scaffold01989: 591263-603578 Cucumis sativus
Cucsa.232780 5.0kb upstream 5.0kb upstream 5000 false scaffold01989: 591263-596262 Cucumis sativus
Cucsa.232780 5.0kb downstream 5.0kb downstream 12316 true scaffold01989: 596263-608578 Cucumis sativus
Cucsa.232780 5.0kb downstream 5.0kb downstream 5000 false scaffold01989: 603579-608578 Cucumis sativus
Cucsa.232780 10.0kb upstream 10.0kb upstream 17316 true scaffold01989: 586263-603578 Cucumis sativus
Cucsa.232780 10.0kb upstream 10.0kb upstream 10000 false scaffold01989: 586263-596262 Cucumis sativus
Cucsa.232780 10.0kb downstream 10.0kb downstream 17316 true scaffold01989: 596263-613578 Cucumis sativus
Cucsa.232780 10.0kb downstream 10.0kb downstream 10000 false scaffold01989: 603579-613578 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304460 5265 Fabidae View MSA
124065604 5270 Rosid View MSA
123741487 5271 Pentapetalae View MSA
122792824 5272 Eudicot View MSA
122048354 5273 Angiosperm View MSA
121350822 5274 Embryophyte View MSA
123381897 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain