Gene : Cucsa.234290 C. sativus v1.0
Defline:  (1 of 1) PTHR11254:SF73 - E3 UBIQUITIN-PROTEIN LIGASE TRIP12 Genomic Order:  27
Name:  ? Cucsa.234290 Secondary Identifier:  ? PAC:16970374
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7511 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.234290 0.5kb upstream 0.5kb upstream 11283 true scaffold01999: 220122-231404 Cucumis sativus
Cucsa.234290 0.5kb upstream 0.5kb upstream 500 false scaffold01999: 230905-231404 Cucumis sativus
Cucsa.234290 0.5kb downstream 0.5kb downstream 11283 true scaffold01999: 219622-230904 Cucumis sativus
Cucsa.234290 0.5kb downstream 0.5kb downstream 500 false scaffold01999: 219622-220121 Cucumis sativus
Cucsa.234290 1.0kb upstream 1.0kb upstream 11783 true scaffold01999: 220122-231904 Cucumis sativus
Cucsa.234290 1.0kb upstream 1.0kb upstream 1000 false scaffold01999: 230905-231904 Cucumis sativus
Cucsa.234290 1.0kb downstream 1.0kb downstream 11783 true scaffold01999: 219122-230904 Cucumis sativus
Cucsa.234290 1.0kb downstream 1.0kb downstream 1000 false scaffold01999: 219122-220121 Cucumis sativus
Cucsa.234290 2.0kb upstream 2.0kb upstream 12783 true scaffold01999: 220122-232904 Cucumis sativus
Cucsa.234290 2.0kb upstream 2.0kb upstream 2000 false scaffold01999: 230905-232904 Cucumis sativus
Cucsa.234290 2.0kb downstream 2.0kb downstream 12783 true scaffold01999: 218122-230904 Cucumis sativus
Cucsa.234290 2.0kb downstream 2.0kb downstream 2000 false scaffold01999: 218122-220121 Cucumis sativus
Cucsa.234290 5.0kb upstream 5.0kb upstream 15783 true scaffold01999: 220122-235904 Cucumis sativus
Cucsa.234290 5.0kb upstream 5.0kb upstream 5000 false scaffold01999: 230905-235904 Cucumis sativus
Cucsa.234290 5.0kb downstream 5.0kb downstream 15783 true scaffold01999: 215122-230904 Cucumis sativus
Cucsa.234290 5.0kb downstream 5.0kb downstream 5000 false scaffold01999: 215122-220121 Cucumis sativus
Cucsa.234290 10.0kb upstream 10.0kb upstream 20783 true scaffold01999: 220122-240904 Cucumis sativus
Cucsa.234290 10.0kb upstream 10.0kb upstream 10000 false scaffold01999: 230905-240904 Cucumis sativus
Cucsa.234290 10.0kb downstream 10.0kb downstream 20783 true scaffold01999: 210122-230904 Cucumis sativus
Cucsa.234290 10.0kb downstream 10.0kb downstream 10000 false scaffold01999: 210122-220121 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312883 5265 Fabidae View MSA
124064467 5270 Rosid View MSA
123740088 5271 Pentapetalae View MSA
122794553 5272 Eudicot View MSA
122042659 5273 Angiosperm View MSA
121345958 5274 Embryophyte View MSA
123428406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain