Gene : Cucsa.235550 C. sativus v1.0
Defline:  (1 of 2) PTHR12161:SF14 - REGULATOR OF VPS4 Genomic Order:  5
Name:  ? Cucsa.235550 Secondary Identifier:  ? PAC:16970410
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.235550 0.5kb upstream 0.5kb upstream 4817 true scaffold02012: 78513-83329 Cucumis sativus
Cucsa.235550 0.5kb upstream 0.5kb upstream 500 false scaffold02012: 78513-79012 Cucumis sativus
Cucsa.235550 0.5kb downstream 0.5kb downstream 4817 true scaffold02012: 79013-83829 Cucumis sativus
Cucsa.235550 0.5kb downstream 0.5kb downstream 500 false scaffold02012: 83330-83829 Cucumis sativus
Cucsa.235550 1.0kb upstream 1.0kb upstream 5317 true scaffold02012: 78013-83329 Cucumis sativus
Cucsa.235550 1.0kb upstream 1.0kb upstream 1000 false scaffold02012: 78013-79012 Cucumis sativus
Cucsa.235550 1.0kb downstream 1.0kb downstream 5317 true scaffold02012: 79013-84329 Cucumis sativus
Cucsa.235550 1.0kb downstream 1.0kb downstream 1000 false scaffold02012: 83330-84329 Cucumis sativus
Cucsa.235550 2.0kb upstream 2.0kb upstream 6317 true scaffold02012: 77013-83329 Cucumis sativus
Cucsa.235550 2.0kb upstream 2.0kb upstream 2000 false scaffold02012: 77013-79012 Cucumis sativus
Cucsa.235550 2.0kb downstream 2.0kb downstream 6317 true scaffold02012: 79013-85329 Cucumis sativus
Cucsa.235550 2.0kb downstream 2.0kb downstream 2000 false scaffold02012: 83330-85329 Cucumis sativus
Cucsa.235550 5.0kb upstream 5.0kb upstream 9317 true scaffold02012: 74013-83329 Cucumis sativus
Cucsa.235550 5.0kb upstream 5.0kb upstream 5000 false scaffold02012: 74013-79012 Cucumis sativus
Cucsa.235550 5.0kb downstream 5.0kb downstream 9317 true scaffold02012: 79013-88329 Cucumis sativus
Cucsa.235550 5.0kb downstream 5.0kb downstream 5000 false scaffold02012: 83330-88329 Cucumis sativus
Cucsa.235550 10.0kb upstream 10.0kb upstream 14317 true scaffold02012: 69013-83329 Cucumis sativus
Cucsa.235550 10.0kb upstream 10.0kb upstream 10000 false scaffold02012: 69013-79012 Cucumis sativus
Cucsa.235550 10.0kb downstream 10.0kb downstream 14317 true scaffold02012: 79013-93329 Cucumis sativus
Cucsa.235550 10.0kb downstream 10.0kb downstream 10000 false scaffold02012: 83330-93329 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299571 5265 Fabidae View MSA
124066649 5270 Rosid View MSA
123746994 5271 Pentapetalae View MSA
122787378 5272 Eudicot View MSA
122041860 5273 Angiosperm View MSA
121351542 5274 Embryophyte View MSA
123382216 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain