Gene : Cucsa.235680 C. sativus v1.0
Defline:  (1 of 133) PF00560 - Leucine Rich Repeat (LRR_1) Genomic Order:  18
Name:  ? Cucsa.235680 Secondary Identifier:  ? PAC:16970425
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.235680 0.5kb upstream 0.5kb upstream 2988 true scaffold02012: 317957-320944 Cucumis sativus
Cucsa.235680 0.5kb upstream 0.5kb upstream 500 false scaffold02012: 317957-318456 Cucumis sativus
Cucsa.235680 0.5kb downstream 0.5kb downstream 2988 true scaffold02012: 318457-321444 Cucumis sativus
Cucsa.235680 0.5kb downstream 0.5kb downstream 500 false scaffold02012: 320945-321444 Cucumis sativus
Cucsa.235680 1.0kb upstream 1.0kb upstream 3488 true scaffold02012: 317457-320944 Cucumis sativus
Cucsa.235680 1.0kb upstream 1.0kb upstream 1000 false scaffold02012: 317457-318456 Cucumis sativus
Cucsa.235680 1.0kb downstream 1.0kb downstream 3488 true scaffold02012: 318457-321944 Cucumis sativus
Cucsa.235680 1.0kb downstream 1.0kb downstream 1000 false scaffold02012: 320945-321944 Cucumis sativus
Cucsa.235680 2.0kb upstream 2.0kb upstream 4488 true scaffold02012: 316457-320944 Cucumis sativus
Cucsa.235680 2.0kb upstream 2.0kb upstream 2000 false scaffold02012: 316457-318456 Cucumis sativus
Cucsa.235680 2.0kb downstream 2.0kb downstream 4488 true scaffold02012: 318457-322944 Cucumis sativus
Cucsa.235680 2.0kb downstream 2.0kb downstream 2000 false scaffold02012: 320945-322944 Cucumis sativus
Cucsa.235680 5.0kb upstream 5.0kb upstream 7488 true scaffold02012: 313457-320944 Cucumis sativus
Cucsa.235680 5.0kb upstream 5.0kb upstream 5000 false scaffold02012: 313457-318456 Cucumis sativus
Cucsa.235680 5.0kb downstream 5.0kb downstream 7488 true scaffold02012: 318457-325944 Cucumis sativus
Cucsa.235680 5.0kb downstream 5.0kb downstream 5000 false scaffold02012: 320945-325944 Cucumis sativus
Cucsa.235680 10.0kb upstream 10.0kb upstream 12488 true scaffold02012: 308457-320944 Cucumis sativus
Cucsa.235680 10.0kb upstream 10.0kb upstream 10000 false scaffold02012: 308457-318456 Cucumis sativus
Cucsa.235680 10.0kb downstream 10.0kb downstream 12488 true scaffold02012: 318457-330944 Cucumis sativus
Cucsa.235680 10.0kb downstream 10.0kb downstream 10000 false scaffold02012: 320945-330944 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308674 5265 Fabidae View MSA
124074520 5270 Rosid View MSA
123751287 5271 Pentapetalae View MSA
122794768 5272 Eudicot View MSA
122048760 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121349764 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain