Gene : Cucsa.235580 C. sativus v1.0
Defline:  (1 of 45) PF03168 - Late embryogenesis abundant protein (LEA_2) Genomic Order:  8
Name:  ? Cucsa.235580 Secondary Identifier:  ? PAC:16970414
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.235580 0.5kb upstream 0.5kb upstream 3144 true scaffold02012: 108834-111977 Cucumis sativus
Cucsa.235580 0.5kb upstream 0.5kb upstream 500 false scaffold02012: 108834-109333 Cucumis sativus
Cucsa.235580 0.5kb downstream 0.5kb downstream 3144 true scaffold02012: 109334-112477 Cucumis sativus
Cucsa.235580 0.5kb downstream 0.5kb downstream 500 false scaffold02012: 111978-112477 Cucumis sativus
Cucsa.235580 1.0kb upstream 1.0kb upstream 3644 true scaffold02012: 108334-111977 Cucumis sativus
Cucsa.235580 1.0kb upstream 1.0kb upstream 1000 false scaffold02012: 108334-109333 Cucumis sativus
Cucsa.235580 1.0kb downstream 1.0kb downstream 3644 true scaffold02012: 109334-112977 Cucumis sativus
Cucsa.235580 1.0kb downstream 1.0kb downstream 1000 false scaffold02012: 111978-112977 Cucumis sativus
Cucsa.235580 2.0kb upstream 2.0kb upstream 4644 true scaffold02012: 107334-111977 Cucumis sativus
Cucsa.235580 2.0kb upstream 2.0kb upstream 2000 false scaffold02012: 107334-109333 Cucumis sativus
Cucsa.235580 2.0kb downstream 2.0kb downstream 4644 true scaffold02012: 109334-113977 Cucumis sativus
Cucsa.235580 2.0kb downstream 2.0kb downstream 2000 false scaffold02012: 111978-113977 Cucumis sativus
Cucsa.235580 5.0kb upstream 5.0kb upstream 7644 true scaffold02012: 104334-111977 Cucumis sativus
Cucsa.235580 5.0kb upstream 5.0kb upstream 5000 false scaffold02012: 104334-109333 Cucumis sativus
Cucsa.235580 5.0kb downstream 5.0kb downstream 7644 true scaffold02012: 109334-116977 Cucumis sativus
Cucsa.235580 5.0kb downstream 5.0kb downstream 5000 false scaffold02012: 111978-116977 Cucumis sativus
Cucsa.235580 10.0kb upstream 10.0kb upstream 12644 true scaffold02012: 99334-111977 Cucumis sativus
Cucsa.235580 10.0kb upstream 10.0kb upstream 10000 false scaffold02012: 99334-109333 Cucumis sativus
Cucsa.235580 10.0kb downstream 10.0kb downstream 12644 true scaffold02012: 109334-121977 Cucumis sativus
Cucsa.235580 10.0kb downstream 10.0kb downstream 10000 false scaffold02012: 111978-121977 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308559 5265 Fabidae View MSA
124071575 5270 Rosid View MSA
123738145 5271 Pentapetalae View MSA
122793617 5272 Eudicot View MSA
122049008 5273 Angiosperm View MSA
121350992 5274 Embryophyte View MSA
123381962 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain