Gene : Cucsa.238280 C. sativus v1.0
Defline:  (1 of 2) PTHR10314:SF21 - TRYPTOPHAN SYNTHASE BETA CHAIN Genomic Order:  136
Name:  ? Cucsa.238280 Secondary Identifier:  ? PAC:16970701
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus TRPSYN-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.238280 0.5kb upstream 0.5kb upstream 3581 true scaffold02023: 902702-906282 Cucumis sativus
Cucsa.238280 0.5kb upstream 0.5kb upstream 500 false scaffold02023: 905783-906282 Cucumis sativus
Cucsa.238280 0.5kb downstream 0.5kb downstream 3581 true scaffold02023: 902202-905782 Cucumis sativus
Cucsa.238280 0.5kb downstream 0.5kb downstream 500 false scaffold02023: 902202-902701 Cucumis sativus
Cucsa.238280 1.0kb upstream 1.0kb upstream 4081 true scaffold02023: 902702-906782 Cucumis sativus
Cucsa.238280 1.0kb upstream 1.0kb upstream 1000 false scaffold02023: 905783-906782 Cucumis sativus
Cucsa.238280 1.0kb downstream 1.0kb downstream 4081 true scaffold02023: 901702-905782 Cucumis sativus
Cucsa.238280 1.0kb downstream 1.0kb downstream 1000 false scaffold02023: 901702-902701 Cucumis sativus
Cucsa.238280 2.0kb upstream 2.0kb upstream 5081 true scaffold02023: 902702-907782 Cucumis sativus
Cucsa.238280 2.0kb upstream 2.0kb upstream 2000 false scaffold02023: 905783-907782 Cucumis sativus
Cucsa.238280 2.0kb downstream 2.0kb downstream 5081 true scaffold02023: 900702-905782 Cucumis sativus
Cucsa.238280 2.0kb downstream 2.0kb downstream 2000 false scaffold02023: 900702-902701 Cucumis sativus
Cucsa.238280 5.0kb upstream 5.0kb upstream 8081 true scaffold02023: 902702-910782 Cucumis sativus
Cucsa.238280 5.0kb upstream 5.0kb upstream 5000 false scaffold02023: 905783-910782 Cucumis sativus
Cucsa.238280 5.0kb downstream 5.0kb downstream 8081 true scaffold02023: 897702-905782 Cucumis sativus
Cucsa.238280 5.0kb downstream 5.0kb downstream 5000 false scaffold02023: 897702-902701 Cucumis sativus
Cucsa.238280 10.0kb upstream 10.0kb upstream 13081 true scaffold02023: 902702-915782 Cucumis sativus
Cucsa.238280 10.0kb upstream 10.0kb upstream 10000 false scaffold02023: 905783-915782 Cucumis sativus
Cucsa.238280 10.0kb downstream 10.0kb downstream 13081 true scaffold02023: 892702-905782 Cucumis sativus
Cucsa.238280 10.0kb downstream 10.0kb downstream 10000 false scaffold02023: 892702-902701 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307865 5265 Fabidae View MSA
124065122 5270 Rosid View MSA
123740538 5271 Pentapetalae View MSA
122790993 5272 Eudicot View MSA
122043348 5273 Angiosperm View MSA
121348084 5274 Embryophyte View MSA
123380724 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain