Gene : Cucsa.238330 C. sativus v1.0
Defline:  (1 of 1) PTHR23076//PTHR23076:SF61 - METALLOPROTEASE M41 FTSH Genomic Order:  141
Name:  ? Cucsa.238330 Secondary Identifier:  ? PAC:16970708
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.238330 0.5kb upstream 0.5kb upstream 2827 true scaffold02023: 926641-929467 Cucumis sativus
Cucsa.238330 0.5kb upstream 0.5kb upstream 500 false scaffold02023: 928968-929467 Cucumis sativus
Cucsa.238330 0.5kb downstream 0.5kb downstream 2827 true scaffold02023: 926141-928967 Cucumis sativus
Cucsa.238330 0.5kb downstream 0.5kb downstream 500 false scaffold02023: 926141-926640 Cucumis sativus
Cucsa.238330 1.0kb upstream 1.0kb upstream 3327 true scaffold02023: 926641-929967 Cucumis sativus
Cucsa.238330 1.0kb upstream 1.0kb upstream 1000 false scaffold02023: 928968-929967 Cucumis sativus
Cucsa.238330 1.0kb downstream 1.0kb downstream 3327 true scaffold02023: 925641-928967 Cucumis sativus
Cucsa.238330 1.0kb downstream 1.0kb downstream 1000 false scaffold02023: 925641-926640 Cucumis sativus
Cucsa.238330 2.0kb upstream 2.0kb upstream 4327 true scaffold02023: 926641-930967 Cucumis sativus
Cucsa.238330 2.0kb upstream 2.0kb upstream 2000 false scaffold02023: 928968-930967 Cucumis sativus
Cucsa.238330 2.0kb downstream 2.0kb downstream 4327 true scaffold02023: 924641-928967 Cucumis sativus
Cucsa.238330 2.0kb downstream 2.0kb downstream 2000 false scaffold02023: 924641-926640 Cucumis sativus
Cucsa.238330 5.0kb upstream 5.0kb upstream 7327 true scaffold02023: 926641-933967 Cucumis sativus
Cucsa.238330 5.0kb upstream 5.0kb upstream 5000 false scaffold02023: 928968-933967 Cucumis sativus
Cucsa.238330 5.0kb downstream 5.0kb downstream 7327 true scaffold02023: 921641-928967 Cucumis sativus
Cucsa.238330 5.0kb downstream 5.0kb downstream 5000 false scaffold02023: 921641-926640 Cucumis sativus
Cucsa.238330 10.0kb upstream 10.0kb upstream 12327 true scaffold02023: 926641-938967 Cucumis sativus
Cucsa.238330 10.0kb upstream 10.0kb upstream 10000 false scaffold02023: 928968-938967 Cucumis sativus
Cucsa.238330 10.0kb downstream 10.0kb downstream 12327 true scaffold02023: 916641-928967 Cucumis sativus
Cucsa.238330 10.0kb downstream 10.0kb downstream 10000 false scaffold02023: 916641-926640 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308691 5265 Fabidae View MSA
124063018 5270 Rosid View MSA
123737747 5271 Pentapetalae View MSA
122793170 5272 Eudicot View MSA
122045675 5273 Angiosperm View MSA
123428918 5275 Viridiplantae View MSA
121344954 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain