Gene : Cucsa.239520 C. sativus v1.0
Defline:  (1 of 1) PTHR23133 - IMIDAZOLEGLYCEROL-PHOSPHATE DEHYDRATASE HIS7 Genomic Order:  37
Name:  ? Cucsa.239520 Secondary Identifier:  ? PAC:16970777
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus HISTSYN-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.239520 0.5kb upstream 0.5kb upstream 3842 true scaffold02046: 305481-309322 Cucumis sativus
Cucsa.239520 0.5kb upstream 0.5kb upstream 500 false scaffold02046: 308823-309322 Cucumis sativus
Cucsa.239520 0.5kb downstream 0.5kb downstream 3842 true scaffold02046: 304981-308822 Cucumis sativus
Cucsa.239520 0.5kb downstream 0.5kb downstream 500 false scaffold02046: 304981-305480 Cucumis sativus
Cucsa.239520 1.0kb upstream 1.0kb upstream 4342 true scaffold02046: 305481-309822 Cucumis sativus
Cucsa.239520 1.0kb upstream 1.0kb upstream 1000 false scaffold02046: 308823-309822 Cucumis sativus
Cucsa.239520 1.0kb downstream 1.0kb downstream 4342 true scaffold02046: 304481-308822 Cucumis sativus
Cucsa.239520 1.0kb downstream 1.0kb downstream 1000 false scaffold02046: 304481-305480 Cucumis sativus
Cucsa.239520 2.0kb upstream 2.0kb upstream 5342 true scaffold02046: 305481-310822 Cucumis sativus
Cucsa.239520 2.0kb upstream 2.0kb upstream 2000 false scaffold02046: 308823-310822 Cucumis sativus
Cucsa.239520 2.0kb downstream 2.0kb downstream 5342 true scaffold02046: 303481-308822 Cucumis sativus
Cucsa.239520 2.0kb downstream 2.0kb downstream 2000 false scaffold02046: 303481-305480 Cucumis sativus
Cucsa.239520 5.0kb upstream 5.0kb upstream 8342 true scaffold02046: 305481-313822 Cucumis sativus
Cucsa.239520 5.0kb upstream 5.0kb upstream 5000 false scaffold02046: 308823-313822 Cucumis sativus
Cucsa.239520 5.0kb downstream 5.0kb downstream 8342 true scaffold02046: 300481-308822 Cucumis sativus
Cucsa.239520 5.0kb downstream 5.0kb downstream 5000 false scaffold02046: 300481-305480 Cucumis sativus
Cucsa.239520 10.0kb upstream 10.0kb upstream 13342 true scaffold02046: 305481-318822 Cucumis sativus
Cucsa.239520 10.0kb upstream 10.0kb upstream 10000 false scaffold02046: 308823-318822 Cucumis sativus
Cucsa.239520 10.0kb downstream 10.0kb downstream 13342 true scaffold02046: 295481-308822 Cucumis sativus
Cucsa.239520 10.0kb downstream 10.0kb downstream 10000 false scaffold02046: 295481-305480 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307930 5265 Fabidae View MSA
124067658 5270 Rosid View MSA
123737408 5271 Pentapetalae View MSA
122786767 5272 Eudicot View MSA
122045110 5273 Angiosperm View MSA
121344413 5274 Embryophyte View MSA
123423926 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain