Gene : Cucsa.244290 C. sativus v1.0
Defline:  (1 of 141) PF00847 - AP2 domain (AP2) Genomic Order:  11
Name:  ? Cucsa.244290 Secondary Identifier:  ? PAC:16971285
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.244290 0.5kb upstream 0.5kb upstream 1325 true scaffold02135: 140711-142035 Cucumis sativus
Cucsa.244290 0.5kb upstream 0.5kb upstream 500 false scaffold02135: 140711-141210 Cucumis sativus
Cucsa.244290 0.5kb downstream 0.5kb downstream 1325 true scaffold02135: 141211-142535 Cucumis sativus
Cucsa.244290 0.5kb downstream 0.5kb downstream 500 false scaffold02135: 142036-142535 Cucumis sativus
Cucsa.244290 1.0kb upstream 1.0kb upstream 1825 true scaffold02135: 140211-142035 Cucumis sativus
Cucsa.244290 1.0kb upstream 1.0kb upstream 1000 false scaffold02135: 140211-141210 Cucumis sativus
Cucsa.244290 1.0kb downstream 1.0kb downstream 1825 true scaffold02135: 141211-143035 Cucumis sativus
Cucsa.244290 1.0kb downstream 1.0kb downstream 1000 false scaffold02135: 142036-143035 Cucumis sativus
Cucsa.244290 2.0kb upstream 2.0kb upstream 2825 true scaffold02135: 139211-142035 Cucumis sativus
Cucsa.244290 2.0kb upstream 2.0kb upstream 2000 false scaffold02135: 139211-141210 Cucumis sativus
Cucsa.244290 2.0kb downstream 2.0kb downstream 2825 true scaffold02135: 141211-144035 Cucumis sativus
Cucsa.244290 2.0kb downstream 2.0kb downstream 2000 false scaffold02135: 142036-144035 Cucumis sativus
Cucsa.244290 5.0kb upstream 5.0kb upstream 5825 true scaffold02135: 136211-142035 Cucumis sativus
Cucsa.244290 5.0kb upstream 5.0kb upstream 5000 false scaffold02135: 136211-141210 Cucumis sativus
Cucsa.244290 5.0kb downstream 5.0kb downstream 5825 true scaffold02135: 141211-147035 Cucumis sativus
Cucsa.244290 5.0kb downstream 5.0kb downstream 5000 false scaffold02135: 142036-147035 Cucumis sativus
Cucsa.244290 10.0kb upstream 10.0kb upstream 10825 true scaffold02135: 131211-142035 Cucumis sativus
Cucsa.244290 10.0kb upstream 10.0kb upstream 10000 false scaffold02135: 131211-141210 Cucumis sativus
Cucsa.244290 10.0kb downstream 10.0kb downstream 10825 true scaffold02135: 141211-152035 Cucumis sativus
Cucsa.244290 10.0kb downstream 10.0kb downstream 10000 false scaffold02135: 142036-152035 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302794 5265 Fabidae View MSA
124073164 5270 Rosid View MSA
123751106 5271 Pentapetalae View MSA
122797584 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain