Gene : Cucsa.248280 C. sativus v1.0
Defline:  (1 of 3) 2.5.1.85 - All-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) / Solanesyl diphosphate synthase Genomic Order:  1
Name:  ? Cucsa.248280 Secondary Identifier:  ? PAC:16971461
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-6520 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.248280 0.5kb upstream 0.5kb upstream 2346 true scaffold02207: 2519-4864 Cucumis sativus
Cucsa.248280 0.5kb upstream 0.5kb upstream 500 false scaffold02207: 4365-4864 Cucumis sativus
Cucsa.248280 0.5kb downstream 0.5kb downstream 2346 true scaffold02207: 2019-4364 Cucumis sativus
Cucsa.248280 0.5kb downstream 0.5kb downstream 500 false scaffold02207: 2019-2518 Cucumis sativus
Cucsa.248280 1.0kb upstream 1.0kb upstream 2846 true scaffold02207: 2519-5364 Cucumis sativus
Cucsa.248280 1.0kb upstream 1.0kb upstream 1000 false scaffold02207: 4365-5364 Cucumis sativus
Cucsa.248280 1.0kb downstream 1.0kb downstream 2846 true scaffold02207: 1519-4364 Cucumis sativus
Cucsa.248280 1.0kb downstream 1.0kb downstream 1000 false scaffold02207: 1519-2518 Cucumis sativus
Cucsa.248280 2.0kb upstream 2.0kb upstream 3846 true scaffold02207: 2519-6364 Cucumis sativus
Cucsa.248280 2.0kb upstream 2.0kb upstream 2000 false scaffold02207: 4365-6364 Cucumis sativus
Cucsa.248280 2.0kb downstream 2.0kb downstream 3846 true scaffold02207: 519-4364 Cucumis sativus
Cucsa.248280 2.0kb downstream 2.0kb downstream 2000 false scaffold02207: 519-2518 Cucumis sativus
Cucsa.248280 5.0kb upstream 5.0kb upstream 6846 true scaffold02207: 2519-9364 Cucumis sativus
Cucsa.248280 5.0kb upstream 5.0kb upstream 5000 false scaffold02207: 4365-9364 Cucumis sativus
Cucsa.248280 5.0kb downstream 5.0kb downstream 4364 true scaffold02207: 1-4364 Cucumis sativus
Cucsa.248280 5.0kb downstream 5.0kb downstream 2518 false scaffold02207: 1-2518 Cucumis sativus
Cucsa.248280 10.0kb upstream 10.0kb upstream 11846 true scaffold02207: 2519-14364 Cucumis sativus
Cucsa.248280 10.0kb upstream 10.0kb upstream 10000 false scaffold02207: 4365-14364 Cucumis sativus
Cucsa.248280 10.0kb downstream 10.0kb downstream 4364 true scaffold02207: 1-4364 Cucumis sativus
Cucsa.248280 10.0kb downstream 10.0kb downstream 2518 false scaffold02207: 1-2518 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121604520 5273 Angiosperm Singleton cluster - no MSA
122234775 5265 Fabidae Singleton cluster - no MSA
123980997 5270 Rosid Singleton cluster - no MSA
123556674 5271 Pentapetalae Singleton cluster - no MSA
122591488 5272 Eudicot Singleton cluster - no MSA
120876810 5274 Embryophyte Singleton cluster - no MSA
122917699 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain