Gene : Cucsa.249000 C. sativus v1.0
Defline:  (1 of 1) PTHR10169:SF38 - DNA TOPOISOMERASE 2 Genomic Order:  20
Name:  ? Cucsa.249000 Secondary Identifier:  ? PAC:16971530
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.249000 0.5kb upstream 0.5kb upstream 7442 true scaffold02208: 168748-176189 Cucumis sativus
Cucsa.249000 0.5kb upstream 0.5kb upstream 500 false scaffold02208: 168748-169247 Cucumis sativus
Cucsa.249000 0.5kb downstream 0.5kb downstream 7442 true scaffold02208: 169248-176689 Cucumis sativus
Cucsa.249000 0.5kb downstream 0.5kb downstream 500 false scaffold02208: 176190-176689 Cucumis sativus
Cucsa.249000 1.0kb upstream 1.0kb upstream 7942 true scaffold02208: 168248-176189 Cucumis sativus
Cucsa.249000 1.0kb upstream 1.0kb upstream 1000 false scaffold02208: 168248-169247 Cucumis sativus
Cucsa.249000 1.0kb downstream 1.0kb downstream 7942 true scaffold02208: 169248-177189 Cucumis sativus
Cucsa.249000 1.0kb downstream 1.0kb downstream 1000 false scaffold02208: 176190-177189 Cucumis sativus
Cucsa.249000 2.0kb upstream 2.0kb upstream 8942 true scaffold02208: 167248-176189 Cucumis sativus
Cucsa.249000 2.0kb upstream 2.0kb upstream 2000 false scaffold02208: 167248-169247 Cucumis sativus
Cucsa.249000 2.0kb downstream 2.0kb downstream 8942 true scaffold02208: 169248-178189 Cucumis sativus
Cucsa.249000 2.0kb downstream 2.0kb downstream 2000 false scaffold02208: 176190-178189 Cucumis sativus
Cucsa.249000 5.0kb upstream 5.0kb upstream 11942 true scaffold02208: 164248-176189 Cucumis sativus
Cucsa.249000 5.0kb upstream 5.0kb upstream 5000 false scaffold02208: 164248-169247 Cucumis sativus
Cucsa.249000 5.0kb downstream 5.0kb downstream 11942 true scaffold02208: 169248-181189 Cucumis sativus
Cucsa.249000 5.0kb downstream 5.0kb downstream 5000 false scaffold02208: 176190-181189 Cucumis sativus
Cucsa.249000 10.0kb upstream 10.0kb upstream 16942 true scaffold02208: 159248-176189 Cucumis sativus
Cucsa.249000 10.0kb upstream 10.0kb upstream 10000 false scaffold02208: 159248-169247 Cucumis sativus
Cucsa.249000 10.0kb downstream 10.0kb downstream 16942 true scaffold02208: 169248-186189 Cucumis sativus
Cucsa.249000 10.0kb downstream 10.0kb downstream 10000 false scaffold02208: 176190-186189 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299523 5265 Fabidae View MSA
124064018 5270 Rosid View MSA
123736481 5271 Pentapetalae View MSA
122791740 5272 Eudicot View MSA
122046291 5273 Angiosperm View MSA
121345151 5274 Embryophyte View MSA
123423865 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain