Gene : Cucsa.249030 C. sativus v1.0
Defline:  (1 of 2) KOG4392 - RNA polymerase, subunit L Genomic Order:  23
Name:  ? Cucsa.249030 Secondary Identifier:  ? PAC:16971535
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.249030 0.5kb upstream 0.5kb upstream 4975 true scaffold02208: 185907-190881 Cucumis sativus
Cucsa.249030 0.5kb upstream 0.5kb upstream 500 false scaffold02208: 190382-190881 Cucumis sativus
Cucsa.249030 0.5kb downstream 0.5kb downstream 4975 true scaffold02208: 185407-190381 Cucumis sativus
Cucsa.249030 0.5kb downstream 0.5kb downstream 500 false scaffold02208: 185407-185906 Cucumis sativus
Cucsa.249030 1.0kb upstream 1.0kb upstream 5475 true scaffold02208: 185907-191381 Cucumis sativus
Cucsa.249030 1.0kb upstream 1.0kb upstream 1000 false scaffold02208: 190382-191381 Cucumis sativus
Cucsa.249030 1.0kb downstream 1.0kb downstream 5475 true scaffold02208: 184907-190381 Cucumis sativus
Cucsa.249030 1.0kb downstream 1.0kb downstream 1000 false scaffold02208: 184907-185906 Cucumis sativus
Cucsa.249030 2.0kb upstream 2.0kb upstream 6475 true scaffold02208: 185907-192381 Cucumis sativus
Cucsa.249030 2.0kb upstream 2.0kb upstream 2000 false scaffold02208: 190382-192381 Cucumis sativus
Cucsa.249030 2.0kb downstream 2.0kb downstream 6475 true scaffold02208: 183907-190381 Cucumis sativus
Cucsa.249030 2.0kb downstream 2.0kb downstream 2000 false scaffold02208: 183907-185906 Cucumis sativus
Cucsa.249030 5.0kb upstream 5.0kb upstream 9475 true scaffold02208: 185907-195381 Cucumis sativus
Cucsa.249030 5.0kb upstream 5.0kb upstream 5000 false scaffold02208: 190382-195381 Cucumis sativus
Cucsa.249030 5.0kb downstream 5.0kb downstream 9475 true scaffold02208: 180907-190381 Cucumis sativus
Cucsa.249030 5.0kb downstream 5.0kb downstream 5000 false scaffold02208: 180907-185906 Cucumis sativus
Cucsa.249030 10.0kb upstream 10.0kb upstream 14475 true scaffold02208: 185907-200381 Cucumis sativus
Cucsa.249030 10.0kb upstream 10.0kb upstream 10000 false scaffold02208: 190382-200381 Cucumis sativus
Cucsa.249030 10.0kb downstream 10.0kb downstream 14475 true scaffold02208: 175907-190381 Cucumis sativus
Cucsa.249030 10.0kb downstream 10.0kb downstream 10000 false scaffold02208: 175907-185906 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300598 5265 Fabidae View MSA
124064272 5270 Rosid View MSA
123749269 5271 Pentapetalae View MSA
122790811 5272 Eudicot View MSA
122043921 5273 Angiosperm View MSA
121349469 5274 Embryophyte View MSA
123424853 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain