Gene : Cucsa.250050 C. sativus v1.0
Defline:  (1 of 3) PTHR11937//PTHR11937:SF247 - ACTIN Genomic Order:  20
Name:  ? Cucsa.250050 Secondary Identifier:  ? PAC:16971601
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.250050 0.5kb upstream 0.5kb upstream 3700 true scaffold02219: 168696-172395 Cucumis sativus
Cucsa.250050 0.5kb upstream 0.5kb upstream 500 false scaffold02219: 168696-169195 Cucumis sativus
Cucsa.250050 0.5kb downstream 0.5kb downstream 3700 true scaffold02219: 169196-172895 Cucumis sativus
Cucsa.250050 0.5kb downstream 0.5kb downstream 500 false scaffold02219: 172396-172895 Cucumis sativus
Cucsa.250050 1.0kb upstream 1.0kb upstream 4200 true scaffold02219: 168196-172395 Cucumis sativus
Cucsa.250050 1.0kb upstream 1.0kb upstream 1000 false scaffold02219: 168196-169195 Cucumis sativus
Cucsa.250050 1.0kb downstream 1.0kb downstream 4200 true scaffold02219: 169196-173395 Cucumis sativus
Cucsa.250050 1.0kb downstream 1.0kb downstream 1000 false scaffold02219: 172396-173395 Cucumis sativus
Cucsa.250050 2.0kb upstream 2.0kb upstream 5200 true scaffold02219: 167196-172395 Cucumis sativus
Cucsa.250050 2.0kb upstream 2.0kb upstream 2000 false scaffold02219: 167196-169195 Cucumis sativus
Cucsa.250050 2.0kb downstream 2.0kb downstream 5200 true scaffold02219: 169196-174395 Cucumis sativus
Cucsa.250050 2.0kb downstream 2.0kb downstream 2000 false scaffold02219: 172396-174395 Cucumis sativus
Cucsa.250050 5.0kb upstream 5.0kb upstream 8200 true scaffold02219: 164196-172395 Cucumis sativus
Cucsa.250050 5.0kb upstream 5.0kb upstream 5000 false scaffold02219: 164196-169195 Cucumis sativus
Cucsa.250050 5.0kb downstream 5.0kb downstream 8200 true scaffold02219: 169196-177395 Cucumis sativus
Cucsa.250050 5.0kb downstream 5.0kb downstream 5000 false scaffold02219: 172396-177395 Cucumis sativus
Cucsa.250050 10.0kb upstream 10.0kb upstream 13200 true scaffold02219: 159196-172395 Cucumis sativus
Cucsa.250050 10.0kb upstream 10.0kb upstream 10000 false scaffold02219: 159196-169195 Cucumis sativus
Cucsa.250050 10.0kb downstream 10.0kb downstream 13200 true scaffold02219: 169196-182395 Cucumis sativus
Cucsa.250050 10.0kb downstream 10.0kb downstream 10000 false scaffold02219: 172396-182395 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122237508 5265 Fabidae View MSA
124051282 5270 Rosid View MSA
123620097 5271 Pentapetalae View MSA
122654513 5272 Eudicot View MSA
122049993 5273 Angiosperm View MSA
123429016 5275 Viridiplantae View MSA
121350794 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain