Gene : Cucsa.250230 C. sativus v1.0
Defline:  (1 of 1) PTHR23416:SF2 - SERINE ACETYLTRANSFERASE 5 Genomic Order:  38
Name:  ? Cucsa.250230 Secondary Identifier:  ? PAC:16971622
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus CYSTSYN-PWY Cucumis sativus pathologic  
Csativus PWY-6936 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.250230 0.5kb upstream 0.5kb upstream 4162 true scaffold02219: 348023-352184 Cucumis sativus
Cucsa.250230 0.5kb upstream 0.5kb upstream 500 false scaffold02219: 351685-352184 Cucumis sativus
Cucsa.250230 0.5kb downstream 0.5kb downstream 4162 true scaffold02219: 347523-351684 Cucumis sativus
Cucsa.250230 0.5kb downstream 0.5kb downstream 500 false scaffold02219: 347523-348022 Cucumis sativus
Cucsa.250230 1.0kb upstream 1.0kb upstream 4662 true scaffold02219: 348023-352684 Cucumis sativus
Cucsa.250230 1.0kb upstream 1.0kb upstream 1000 false scaffold02219: 351685-352684 Cucumis sativus
Cucsa.250230 1.0kb downstream 1.0kb downstream 4662 true scaffold02219: 347023-351684 Cucumis sativus
Cucsa.250230 1.0kb downstream 1.0kb downstream 1000 false scaffold02219: 347023-348022 Cucumis sativus
Cucsa.250230 2.0kb upstream 2.0kb upstream 5662 true scaffold02219: 348023-353684 Cucumis sativus
Cucsa.250230 2.0kb upstream 2.0kb upstream 2000 false scaffold02219: 351685-353684 Cucumis sativus
Cucsa.250230 2.0kb downstream 2.0kb downstream 5662 true scaffold02219: 346023-351684 Cucumis sativus
Cucsa.250230 2.0kb downstream 2.0kb downstream 2000 false scaffold02219: 346023-348022 Cucumis sativus
Cucsa.250230 5.0kb upstream 5.0kb upstream 8662 true scaffold02219: 348023-356684 Cucumis sativus
Cucsa.250230 5.0kb upstream 5.0kb upstream 5000 false scaffold02219: 351685-356684 Cucumis sativus
Cucsa.250230 5.0kb downstream 5.0kb downstream 8662 true scaffold02219: 343023-351684 Cucumis sativus
Cucsa.250230 5.0kb downstream 5.0kb downstream 5000 false scaffold02219: 343023-348022 Cucumis sativus
Cucsa.250230 10.0kb upstream 10.0kb upstream 13662 true scaffold02219: 348023-361684 Cucumis sativus
Cucsa.250230 10.0kb upstream 10.0kb upstream 10000 false scaffold02219: 351685-361684 Cucumis sativus
Cucsa.250230 10.0kb downstream 10.0kb downstream 13662 true scaffold02219: 338023-351684 Cucumis sativus
Cucsa.250230 10.0kb downstream 10.0kb downstream 10000 false scaffold02219: 338023-348022 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309116 5265 Fabidae View MSA
124068098 5270 Rosid View MSA
123738273 5271 Pentapetalae View MSA
122789751 5272 Eudicot View MSA
122047158 5273 Angiosperm View MSA
121348374 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain