Gene : Cucsa.250300 C. sativus v1.0
Defline:  (1 of 2) 1.1.1.25 - Shikimate dehydrogenase / Shikimate:NADP(+) oxidoreductase Genomic Order:  45
Name:  ? Cucsa.250300 Secondary Identifier:  ? PAC:16971634
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus ARO-PWY Cucumis sativus pathologic  
Csativus PWY-6163 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.250300 0.5kb upstream 0.5kb upstream 10008 true scaffold02219: 445144-455151 Cucumis sativus
Cucsa.250300 0.5kb upstream 0.5kb upstream 500 false scaffold02219: 454652-455151 Cucumis sativus
Cucsa.250300 0.5kb downstream 0.5kb downstream 10008 true scaffold02219: 444644-454651 Cucumis sativus
Cucsa.250300 0.5kb downstream 0.5kb downstream 500 false scaffold02219: 444644-445143 Cucumis sativus
Cucsa.250300 1.0kb upstream 1.0kb upstream 10508 true scaffold02219: 445144-455651 Cucumis sativus
Cucsa.250300 1.0kb upstream 1.0kb upstream 1000 false scaffold02219: 454652-455651 Cucumis sativus
Cucsa.250300 1.0kb downstream 1.0kb downstream 10508 true scaffold02219: 444144-454651 Cucumis sativus
Cucsa.250300 1.0kb downstream 1.0kb downstream 1000 false scaffold02219: 444144-445143 Cucumis sativus
Cucsa.250300 2.0kb upstream 2.0kb upstream 11508 true scaffold02219: 445144-456651 Cucumis sativus
Cucsa.250300 2.0kb upstream 2.0kb upstream 2000 false scaffold02219: 454652-456651 Cucumis sativus
Cucsa.250300 2.0kb downstream 2.0kb downstream 11508 true scaffold02219: 443144-454651 Cucumis sativus
Cucsa.250300 2.0kb downstream 2.0kb downstream 2000 false scaffold02219: 443144-445143 Cucumis sativus
Cucsa.250300 5.0kb upstream 5.0kb upstream 14508 true scaffold02219: 445144-459651 Cucumis sativus
Cucsa.250300 5.0kb upstream 5.0kb upstream 5000 false scaffold02219: 454652-459651 Cucumis sativus
Cucsa.250300 5.0kb downstream 5.0kb downstream 14508 true scaffold02219: 440144-454651 Cucumis sativus
Cucsa.250300 5.0kb downstream 5.0kb downstream 5000 false scaffold02219: 440144-445143 Cucumis sativus
Cucsa.250300 10.0kb upstream 10.0kb upstream 19508 true scaffold02219: 445144-464651 Cucumis sativus
Cucsa.250300 10.0kb upstream 10.0kb upstream 10000 false scaffold02219: 454652-464651 Cucumis sativus
Cucsa.250300 10.0kb downstream 10.0kb downstream 19508 true scaffold02219: 435144-454651 Cucumis sativus
Cucsa.250300 10.0kb downstream 10.0kb downstream 10000 false scaffold02219: 435144-445143 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309838 5265 Fabidae View MSA
124068153 5270 Rosid View MSA
123743031 5271 Pentapetalae View MSA
122788487 5272 Eudicot View MSA
122045026 5273 Angiosperm View MSA
121345779 5274 Embryophyte View MSA
123427556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain