Gene : Cucsa.250460 C. sativus v1.0
Defline:  (1 of 2) PTHR12001:SF52 - GERANYLGERANYL PYROPHOSPHATE SYNTHASE 10, MITOCHONDRIAL-RELATED Genomic Order:  61
Name:  ? Cucsa.250460 Secondary Identifier:  ? PAC:16971676
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-5120 Cucumis sativus pathologic  
Csativus PWY-5910 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.250460 0.5kb upstream 0.5kb upstream 2207 true scaffold02219: 609135-611341 Cucumis sativus
Cucsa.250460 0.5kb upstream 0.5kb upstream 500 false scaffold02219: 610842-611341 Cucumis sativus
Cucsa.250460 0.5kb downstream 0.5kb downstream 2207 true scaffold02219: 608635-610841 Cucumis sativus
Cucsa.250460 0.5kb downstream 0.5kb downstream 500 false scaffold02219: 608635-609134 Cucumis sativus
Cucsa.250460 1.0kb upstream 1.0kb upstream 2707 true scaffold02219: 609135-611841 Cucumis sativus
Cucsa.250460 1.0kb upstream 1.0kb upstream 1000 false scaffold02219: 610842-611841 Cucumis sativus
Cucsa.250460 1.0kb downstream 1.0kb downstream 2707 true scaffold02219: 608135-610841 Cucumis sativus
Cucsa.250460 1.0kb downstream 1.0kb downstream 1000 false scaffold02219: 608135-609134 Cucumis sativus
Cucsa.250460 2.0kb upstream 2.0kb upstream 3707 true scaffold02219: 609135-612841 Cucumis sativus
Cucsa.250460 2.0kb upstream 2.0kb upstream 2000 false scaffold02219: 610842-612841 Cucumis sativus
Cucsa.250460 2.0kb downstream 2.0kb downstream 3707 true scaffold02219: 607135-610841 Cucumis sativus
Cucsa.250460 2.0kb downstream 2.0kb downstream 2000 false scaffold02219: 607135-609134 Cucumis sativus
Cucsa.250460 5.0kb upstream 5.0kb upstream 6707 true scaffold02219: 609135-615841 Cucumis sativus
Cucsa.250460 5.0kb upstream 5.0kb upstream 5000 false scaffold02219: 610842-615841 Cucumis sativus
Cucsa.250460 5.0kb downstream 5.0kb downstream 6707 true scaffold02219: 604135-610841 Cucumis sativus
Cucsa.250460 5.0kb downstream 5.0kb downstream 5000 false scaffold02219: 604135-609134 Cucumis sativus
Cucsa.250460 10.0kb upstream 10.0kb upstream 11707 true scaffold02219: 609135-620841 Cucumis sativus
Cucsa.250460 10.0kb upstream 10.0kb upstream 10000 false scaffold02219: 610842-620841 Cucumis sativus
Cucsa.250460 10.0kb downstream 10.0kb downstream 11707 true scaffold02219: 599135-610841 Cucumis sativus
Cucsa.250460 10.0kb downstream 10.0kb downstream 10000 false scaffold02219: 599135-609134 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300633 5265 Fabidae View MSA
124062615 5270 Rosid View MSA
123750127 5271 Pentapetalae View MSA
122794006 5272 Eudicot View MSA
122045672 5273 Angiosperm View MSA
121348382 5274 Embryophyte View MSA
123424390 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain