Gene : Cucsa.250500 C. sativus v1.0
Defline:  (1 of 2) 2.4.1.25 - 4-alpha-glucanotransferase / Oligo-1,4-1,4-glucantransferase Genomic Order:  65
Name:  ? Cucsa.250500 Secondary Identifier:  ? PAC:16971681
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-6724 Cucumis sativus pathologic  
Csativus PWY-7238 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.250500 0.5kb upstream 0.5kb upstream 9455 true scaffold02219: 627857-637311 Cucumis sativus
Cucsa.250500 0.5kb upstream 0.5kb upstream 500 false scaffold02219: 627857-628356 Cucumis sativus
Cucsa.250500 0.5kb downstream 0.5kb downstream 9455 true scaffold02219: 628357-637811 Cucumis sativus
Cucsa.250500 0.5kb downstream 0.5kb downstream 500 false scaffold02219: 637312-637811 Cucumis sativus
Cucsa.250500 1.0kb upstream 1.0kb upstream 9955 true scaffold02219: 627357-637311 Cucumis sativus
Cucsa.250500 1.0kb upstream 1.0kb upstream 1000 false scaffold02219: 627357-628356 Cucumis sativus
Cucsa.250500 1.0kb downstream 1.0kb downstream 9955 true scaffold02219: 628357-638311 Cucumis sativus
Cucsa.250500 1.0kb downstream 1.0kb downstream 1000 false scaffold02219: 637312-638311 Cucumis sativus
Cucsa.250500 2.0kb upstream 2.0kb upstream 10955 true scaffold02219: 626357-637311 Cucumis sativus
Cucsa.250500 2.0kb upstream 2.0kb upstream 2000 false scaffold02219: 626357-628356 Cucumis sativus
Cucsa.250500 2.0kb downstream 2.0kb downstream 10955 true scaffold02219: 628357-639311 Cucumis sativus
Cucsa.250500 2.0kb downstream 2.0kb downstream 2000 false scaffold02219: 637312-639311 Cucumis sativus
Cucsa.250500 5.0kb upstream 5.0kb upstream 13955 true scaffold02219: 623357-637311 Cucumis sativus
Cucsa.250500 5.0kb upstream 5.0kb upstream 5000 false scaffold02219: 623357-628356 Cucumis sativus
Cucsa.250500 5.0kb downstream 5.0kb downstream 13955 true scaffold02219: 628357-642311 Cucumis sativus
Cucsa.250500 5.0kb downstream 5.0kb downstream 5000 false scaffold02219: 637312-642311 Cucumis sativus
Cucsa.250500 10.0kb upstream 10.0kb upstream 18955 true scaffold02219: 618357-637311 Cucumis sativus
Cucsa.250500 10.0kb upstream 10.0kb upstream 10000 false scaffold02219: 618357-628356 Cucumis sativus
Cucsa.250500 10.0kb downstream 10.0kb downstream 18955 true scaffold02219: 628357-647311 Cucumis sativus
Cucsa.250500 10.0kb downstream 10.0kb downstream 10000 false scaffold02219: 637312-647311 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308920 5265 Fabidae View MSA
124069427 5270 Rosid View MSA
123741915 5271 Pentapetalae View MSA
122794283 5272 Eudicot View MSA
122048475 5273 Angiosperm View MSA
121348239 5274 Embryophyte View MSA
123427426 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain