Gene : Cucsa.251220 C. sativus v1.0
Defline:  (1 of 5) PTHR13935:SF54 - TRANSCRIPTION FACTOR BHLH118-RELATED Genomic Order:  38
Name:  ? Cucsa.251220 Secondary Identifier:  ? PAC:16971763
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.251220 0.5kb upstream 0.5kb upstream 1900 true scaffold02229: 359361-361260 Cucumis sativus
Cucsa.251220 0.5kb upstream 0.5kb upstream 500 false scaffold02229: 360761-361260 Cucumis sativus
Cucsa.251220 0.5kb downstream 0.5kb downstream 1900 true scaffold02229: 358861-360760 Cucumis sativus
Cucsa.251220 0.5kb downstream 0.5kb downstream 500 false scaffold02229: 358861-359360 Cucumis sativus
Cucsa.251220 1.0kb upstream 1.0kb upstream 2400 true scaffold02229: 359361-361760 Cucumis sativus
Cucsa.251220 1.0kb upstream 1.0kb upstream 1000 false scaffold02229: 360761-361760 Cucumis sativus
Cucsa.251220 1.0kb downstream 1.0kb downstream 2400 true scaffold02229: 358361-360760 Cucumis sativus
Cucsa.251220 1.0kb downstream 1.0kb downstream 1000 false scaffold02229: 358361-359360 Cucumis sativus
Cucsa.251220 2.0kb upstream 2.0kb upstream 3400 true scaffold02229: 359361-362760 Cucumis sativus
Cucsa.251220 2.0kb upstream 2.0kb upstream 2000 false scaffold02229: 360761-362760 Cucumis sativus
Cucsa.251220 2.0kb downstream 2.0kb downstream 3400 true scaffold02229: 357361-360760 Cucumis sativus
Cucsa.251220 2.0kb downstream 2.0kb downstream 2000 false scaffold02229: 357361-359360 Cucumis sativus
Cucsa.251220 5.0kb upstream 5.0kb upstream 6400 true scaffold02229: 359361-365760 Cucumis sativus
Cucsa.251220 5.0kb upstream 5.0kb upstream 5000 false scaffold02229: 360761-365760 Cucumis sativus
Cucsa.251220 5.0kb downstream 5.0kb downstream 6400 true scaffold02229: 354361-360760 Cucumis sativus
Cucsa.251220 5.0kb downstream 5.0kb downstream 5000 false scaffold02229: 354361-359360 Cucumis sativus
Cucsa.251220 10.0kb upstream 10.0kb upstream 11400 true scaffold02229: 359361-370760 Cucumis sativus
Cucsa.251220 10.0kb upstream 10.0kb upstream 10000 false scaffold02229: 360761-370760 Cucumis sativus
Cucsa.251220 10.0kb downstream 10.0kb downstream 11400 true scaffold02229: 349361-360760 Cucumis sativus
Cucsa.251220 10.0kb downstream 10.0kb downstream 10000 false scaffold02229: 349361-359360 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314557 5265 Fabidae View MSA
124073139 5270 Rosid View MSA
123750941 5271 Pentapetalae View MSA
122792125 5272 Eudicot View MSA
122050150 5273 Angiosperm View MSA
121311764 5274 Embryophyte View MSA
123349017 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain