Gene : Cucsa.252820 C. sativus v1.0
Defline:  (1 of 1) PTHR22904:SF169 - RNA POLYMERASE II-ASSOCIATED PROTEIN 3 Genomic Order:  198
Name:  ? Cucsa.252820 Secondary Identifier:  ? PAC:16971993
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.252820 0.5kb upstream 0.5kb upstream 3393 true scaffold02229: 1680061-1683453 Cucumis sativus
Cucsa.252820 0.5kb upstream 0.5kb upstream 500 false scaffold02229: 1682954-1683453 Cucumis sativus
Cucsa.252820 0.5kb downstream 0.5kb downstream 3393 true scaffold02229: 1679561-1682953 Cucumis sativus
Cucsa.252820 0.5kb downstream 0.5kb downstream 500 false scaffold02229: 1679561-1680060 Cucumis sativus
Cucsa.252820 1.0kb upstream 1.0kb upstream 3893 true scaffold02229: 1680061-1683953 Cucumis sativus
Cucsa.252820 1.0kb upstream 1.0kb upstream 1000 false scaffold02229: 1682954-1683953 Cucumis sativus
Cucsa.252820 1.0kb downstream 1.0kb downstream 3893 true scaffold02229: 1679061-1682953 Cucumis sativus
Cucsa.252820 1.0kb downstream 1.0kb downstream 1000 false scaffold02229: 1679061-1680060 Cucumis sativus
Cucsa.252820 2.0kb upstream 2.0kb upstream 4893 true scaffold02229: 1680061-1684953 Cucumis sativus
Cucsa.252820 2.0kb upstream 2.0kb upstream 2000 false scaffold02229: 1682954-1684953 Cucumis sativus
Cucsa.252820 2.0kb downstream 2.0kb downstream 4893 true scaffold02229: 1678061-1682953 Cucumis sativus
Cucsa.252820 2.0kb downstream 2.0kb downstream 2000 false scaffold02229: 1678061-1680060 Cucumis sativus
Cucsa.252820 5.0kb upstream 5.0kb upstream 7893 true scaffold02229: 1680061-1687953 Cucumis sativus
Cucsa.252820 5.0kb upstream 5.0kb upstream 5000 false scaffold02229: 1682954-1687953 Cucumis sativus
Cucsa.252820 5.0kb downstream 5.0kb downstream 7893 true scaffold02229: 1675061-1682953 Cucumis sativus
Cucsa.252820 5.0kb downstream 5.0kb downstream 5000 false scaffold02229: 1675061-1680060 Cucumis sativus
Cucsa.252820 10.0kb upstream 10.0kb upstream 12893 true scaffold02229: 1680061-1692953 Cucumis sativus
Cucsa.252820 10.0kb upstream 10.0kb upstream 10000 false scaffold02229: 1682954-1692953 Cucumis sativus
Cucsa.252820 10.0kb downstream 10.0kb downstream 12893 true scaffold02229: 1670061-1682953 Cucumis sativus
Cucsa.252820 10.0kb downstream 10.0kb downstream 10000 false scaffold02229: 1670061-1680060 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026696 5273 Angiosperm View MSA
122303253 5265 Fabidae View MSA
124069433 5270 Rosid View MSA
123746924 5271 Pentapetalae View MSA
122794448 5272 Eudicot View MSA
123429169 5275 Viridiplantae View MSA
121348213 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain