Gene : Cucsa.253080 C. sativus v1.0
Defline:  (1 of 3) 6.1.1.5 - Isoleucine--tRNA ligase / Isoleucyl-tRNA synthetase Genomic Order:  224
Name:  ? Cucsa.253080 Secondary Identifier:  ? PAC:16972028
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus TRNA-CHARGING-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.253080 0.5kb upstream 0.5kb upstream 9731 true scaffold02229: 1824555-1834285 Cucumis sativus
Cucsa.253080 0.5kb upstream 0.5kb upstream 500 false scaffold02229: 1824555-1825054 Cucumis sativus
Cucsa.253080 0.5kb downstream 0.5kb downstream 9731 true scaffold02229: 1825055-1834785 Cucumis sativus
Cucsa.253080 0.5kb downstream 0.5kb downstream 500 false scaffold02229: 1834286-1834785 Cucumis sativus
Cucsa.253080 1.0kb upstream 1.0kb upstream 10231 true scaffold02229: 1824055-1834285 Cucumis sativus
Cucsa.253080 1.0kb upstream 1.0kb upstream 1000 false scaffold02229: 1824055-1825054 Cucumis sativus
Cucsa.253080 1.0kb downstream 1.0kb downstream 10231 true scaffold02229: 1825055-1835285 Cucumis sativus
Cucsa.253080 1.0kb downstream 1.0kb downstream 1000 false scaffold02229: 1834286-1835285 Cucumis sativus
Cucsa.253080 2.0kb upstream 2.0kb upstream 11231 true scaffold02229: 1823055-1834285 Cucumis sativus
Cucsa.253080 2.0kb upstream 2.0kb upstream 2000 false scaffold02229: 1823055-1825054 Cucumis sativus
Cucsa.253080 2.0kb downstream 2.0kb downstream 11231 true scaffold02229: 1825055-1836285 Cucumis sativus
Cucsa.253080 2.0kb downstream 2.0kb downstream 2000 false scaffold02229: 1834286-1836285 Cucumis sativus
Cucsa.253080 5.0kb upstream 5.0kb upstream 14231 true scaffold02229: 1820055-1834285 Cucumis sativus
Cucsa.253080 5.0kb upstream 5.0kb upstream 5000 false scaffold02229: 1820055-1825054 Cucumis sativus
Cucsa.253080 5.0kb downstream 5.0kb downstream 14231 true scaffold02229: 1825055-1839285 Cucumis sativus
Cucsa.253080 5.0kb downstream 5.0kb downstream 5000 false scaffold02229: 1834286-1839285 Cucumis sativus
Cucsa.253080 10.0kb upstream 10.0kb upstream 19231 true scaffold02229: 1815055-1834285 Cucumis sativus
Cucsa.253080 10.0kb upstream 10.0kb upstream 10000 false scaffold02229: 1815055-1825054 Cucumis sativus
Cucsa.253080 10.0kb downstream 10.0kb downstream 19231 true scaffold02229: 1825055-1844285 Cucumis sativus
Cucsa.253080 10.0kb downstream 10.0kb downstream 10000 false scaffold02229: 1834286-1844285 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308695 5265 Fabidae View MSA
124064635 5270 Rosid View MSA
123740769 5271 Pentapetalae View MSA
122790755 5272 Eudicot View MSA
122042566 5273 Angiosperm View MSA
121346634 5274 Embryophyte View MSA
123424788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain