Gene : Cucsa.253880 C. sativus v1.0
Defline:  (1 of 1) PTHR20852:SF53 - GLUTAMINE SYNTHETASE, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  304
Name:  ? Cucsa.253880 Secondary Identifier:  ? PAC:16972160
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus GLNSYN-PWY Cucumis sativus pathologic  
Csativus PWY-3282 Cucumis sativus pathologic  
Csativus PWY-381 Cucumis sativus pathologic  
Csativus PWY-6549 Cucumis sativus pathologic  
Csativus PWY-6963 Cucumis sativus pathologic  
Csativus PWY-6964 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.253880 0.5kb upstream 0.5kb upstream 6232 true scaffold02229: 2354367-2360598 Cucumis sativus
Cucsa.253880 0.5kb upstream 0.5kb upstream 500 false scaffold02229: 2360099-2360598 Cucumis sativus
Cucsa.253880 0.5kb downstream 0.5kb downstream 6232 true scaffold02229: 2353867-2360098 Cucumis sativus
Cucsa.253880 0.5kb downstream 0.5kb downstream 500 false scaffold02229: 2353867-2354366 Cucumis sativus
Cucsa.253880 1.0kb upstream 1.0kb upstream 6732 true scaffold02229: 2354367-2361098 Cucumis sativus
Cucsa.253880 1.0kb upstream 1.0kb upstream 1000 false scaffold02229: 2360099-2361098 Cucumis sativus
Cucsa.253880 1.0kb downstream 1.0kb downstream 6732 true scaffold02229: 2353367-2360098 Cucumis sativus
Cucsa.253880 1.0kb downstream 1.0kb downstream 1000 false scaffold02229: 2353367-2354366 Cucumis sativus
Cucsa.253880 2.0kb upstream 2.0kb upstream 7732 true scaffold02229: 2354367-2362098 Cucumis sativus
Cucsa.253880 2.0kb upstream 2.0kb upstream 2000 false scaffold02229: 2360099-2362098 Cucumis sativus
Cucsa.253880 2.0kb downstream 2.0kb downstream 7732 true scaffold02229: 2352367-2360098 Cucumis sativus
Cucsa.253880 2.0kb downstream 2.0kb downstream 2000 false scaffold02229: 2352367-2354366 Cucumis sativus
Cucsa.253880 5.0kb upstream 5.0kb upstream 10732 true scaffold02229: 2354367-2365098 Cucumis sativus
Cucsa.253880 5.0kb upstream 5.0kb upstream 5000 false scaffold02229: 2360099-2365098 Cucumis sativus
Cucsa.253880 5.0kb downstream 5.0kb downstream 10732 true scaffold02229: 2349367-2360098 Cucumis sativus
Cucsa.253880 5.0kb downstream 5.0kb downstream 5000 false scaffold02229: 2349367-2354366 Cucumis sativus
Cucsa.253880 10.0kb upstream 10.0kb upstream 15732 true scaffold02229: 2354367-2370098 Cucumis sativus
Cucsa.253880 10.0kb upstream 10.0kb upstream 10000 false scaffold02229: 2360099-2370098 Cucumis sativus
Cucsa.253880 10.0kb downstream 10.0kb downstream 15732 true scaffold02229: 2344367-2360098 Cucumis sativus
Cucsa.253880 10.0kb downstream 10.0kb downstream 10000 false scaffold02229: 2344367-2354366 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301518 5265 Fabidae View MSA
124069672 5270 Rosid View MSA
123741738 5271 Pentapetalae View MSA
122788688 5272 Eudicot View MSA
122046528 5273 Angiosperm View MSA
121310618 5274 Embryophyte View MSA
123428761 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain