Gene : Cucsa.255990 C. sativus v1.0
Defline:  (1 of 1) PTHR31332:SF0 - 7-HYDROXYMETHYL CHLOROPHYLL A REDUCTASE, CHLOROPLASTIC Genomic Order:  512
Name:  ? Cucsa.255990 Secondary Identifier:  ? PAC:16972475
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-5068 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.255990 0.5kb upstream 0.5kb upstream 7422 true scaffold02229: 3752084-3759505 Cucumis sativus
Cucsa.255990 0.5kb upstream 0.5kb upstream 500 false scaffold02229: 3759006-3759505 Cucumis sativus
Cucsa.255990 0.5kb downstream 0.5kb downstream 7422 true scaffold02229: 3751584-3759005 Cucumis sativus
Cucsa.255990 0.5kb downstream 0.5kb downstream 500 false scaffold02229: 3751584-3752083 Cucumis sativus
Cucsa.255990 1.0kb upstream 1.0kb upstream 7922 true scaffold02229: 3752084-3760005 Cucumis sativus
Cucsa.255990 1.0kb upstream 1.0kb upstream 1000 false scaffold02229: 3759006-3760005 Cucumis sativus
Cucsa.255990 1.0kb downstream 1.0kb downstream 7922 true scaffold02229: 3751084-3759005 Cucumis sativus
Cucsa.255990 1.0kb downstream 1.0kb downstream 1000 false scaffold02229: 3751084-3752083 Cucumis sativus
Cucsa.255990 2.0kb upstream 2.0kb upstream 8922 true scaffold02229: 3752084-3761005 Cucumis sativus
Cucsa.255990 2.0kb upstream 2.0kb upstream 2000 false scaffold02229: 3759006-3761005 Cucumis sativus
Cucsa.255990 2.0kb downstream 2.0kb downstream 8922 true scaffold02229: 3750084-3759005 Cucumis sativus
Cucsa.255990 2.0kb downstream 2.0kb downstream 2000 false scaffold02229: 3750084-3752083 Cucumis sativus
Cucsa.255990 5.0kb upstream 5.0kb upstream 11922 true scaffold02229: 3752084-3764005 Cucumis sativus
Cucsa.255990 5.0kb upstream 5.0kb upstream 5000 false scaffold02229: 3759006-3764005 Cucumis sativus
Cucsa.255990 5.0kb downstream 5.0kb downstream 11922 true scaffold02229: 3747084-3759005 Cucumis sativus
Cucsa.255990 5.0kb downstream 5.0kb downstream 5000 false scaffold02229: 3747084-3752083 Cucumis sativus
Cucsa.255990 10.0kb upstream 10.0kb upstream 16922 true scaffold02229: 3752084-3769005 Cucumis sativus
Cucsa.255990 10.0kb upstream 10.0kb upstream 10000 false scaffold02229: 3759006-3769005 Cucumis sativus
Cucsa.255990 10.0kb downstream 10.0kb downstream 16922 true scaffold02229: 3742084-3759005 Cucumis sativus
Cucsa.255990 10.0kb downstream 10.0kb downstream 10000 false scaffold02229: 3742084-3752083 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308112 5265 Fabidae View MSA
124061681 5270 Rosid View MSA
123745545 5271 Pentapetalae View MSA
122786931 5272 Eudicot View MSA
122042244 5273 Angiosperm View MSA
121347616 5274 Embryophyte View MSA
123428400 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain