Gene : Cucsa.259760 C. sativus v1.0
Defline:  (1 of 1) PTHR23163:SF3 - E3 UBIQUITIN-PROTEIN LIGASE BRE1-LIKE 1 Genomic Order:  884
Name:  ? Cucsa.259760 Secondary Identifier:  ? PAC:16973067
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7511 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.259760 0.5kb upstream 0.5kb upstream 12078 true scaffold02229: 6120077-6132154 Cucumis sativus
Cucsa.259760 0.5kb upstream 0.5kb upstream 500 false scaffold02229: 6131655-6132154 Cucumis sativus
Cucsa.259760 0.5kb downstream 0.5kb downstream 12078 true scaffold02229: 6119577-6131654 Cucumis sativus
Cucsa.259760 0.5kb downstream 0.5kb downstream 500 false scaffold02229: 6119577-6120076 Cucumis sativus
Cucsa.259760 1.0kb upstream 1.0kb upstream 12578 true scaffold02229: 6120077-6132654 Cucumis sativus
Cucsa.259760 1.0kb upstream 1.0kb upstream 1000 false scaffold02229: 6131655-6132654 Cucumis sativus
Cucsa.259760 1.0kb downstream 1.0kb downstream 12578 true scaffold02229: 6119077-6131654 Cucumis sativus
Cucsa.259760 1.0kb downstream 1.0kb downstream 1000 false scaffold02229: 6119077-6120076 Cucumis sativus
Cucsa.259760 2.0kb upstream 2.0kb upstream 13578 true scaffold02229: 6120077-6133654 Cucumis sativus
Cucsa.259760 2.0kb upstream 2.0kb upstream 2000 false scaffold02229: 6131655-6133654 Cucumis sativus
Cucsa.259760 2.0kb downstream 2.0kb downstream 13578 true scaffold02229: 6118077-6131654 Cucumis sativus
Cucsa.259760 2.0kb downstream 2.0kb downstream 2000 false scaffold02229: 6118077-6120076 Cucumis sativus
Cucsa.259760 5.0kb upstream 5.0kb upstream 16578 true scaffold02229: 6120077-6136654 Cucumis sativus
Cucsa.259760 5.0kb upstream 5.0kb upstream 5000 false scaffold02229: 6131655-6136654 Cucumis sativus
Cucsa.259760 5.0kb downstream 5.0kb downstream 16578 true scaffold02229: 6115077-6131654 Cucumis sativus
Cucsa.259760 5.0kb downstream 5.0kb downstream 5000 false scaffold02229: 6115077-6120076 Cucumis sativus
Cucsa.259760 10.0kb upstream 10.0kb upstream 21578 true scaffold02229: 6120077-6141654 Cucumis sativus
Cucsa.259760 10.0kb upstream 10.0kb upstream 10000 false scaffold02229: 6131655-6141654 Cucumis sativus
Cucsa.259760 10.0kb downstream 10.0kb downstream 21578 true scaffold02229: 6110077-6131654 Cucumis sativus
Cucsa.259760 10.0kb downstream 10.0kb downstream 10000 false scaffold02229: 6110077-6120076 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307119 5265 Fabidae View MSA
124061906 5270 Rosid View MSA
123753299 5271 Pentapetalae View MSA
122793673 5272 Eudicot View MSA
122042098 5273 Angiosperm View MSA
121349326 5274 Embryophyte View MSA
123423997 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain