Gene : Cucsa.260240 C. sativus v1.0
Defline:  (1 of 4) 2.2.1.7 - 1-deoxy-D-xylulose-5-phosphate synthase / DXP-synthase Genomic Order:  931
Name:  ? Cucsa.260240 Secondary Identifier:  ? PAC:16973141
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7560 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.260240 0.5kb upstream 0.5kb upstream 3783 true scaffold02229: 6582648-6586430 Cucumis sativus
Cucsa.260240 0.5kb upstream 0.5kb upstream 500 false scaffold02229: 6582648-6583147 Cucumis sativus
Cucsa.260240 0.5kb downstream 0.5kb downstream 3783 true scaffold02229: 6583148-6586930 Cucumis sativus
Cucsa.260240 0.5kb downstream 0.5kb downstream 500 false scaffold02229: 6586431-6586930 Cucumis sativus
Cucsa.260240 1.0kb upstream 1.0kb upstream 4283 true scaffold02229: 6582148-6586430 Cucumis sativus
Cucsa.260240 1.0kb upstream 1.0kb upstream 1000 false scaffold02229: 6582148-6583147 Cucumis sativus
Cucsa.260240 1.0kb downstream 1.0kb downstream 4283 true scaffold02229: 6583148-6587430 Cucumis sativus
Cucsa.260240 1.0kb downstream 1.0kb downstream 1000 false scaffold02229: 6586431-6587430 Cucumis sativus
Cucsa.260240 2.0kb upstream 2.0kb upstream 5283 true scaffold02229: 6581148-6586430 Cucumis sativus
Cucsa.260240 2.0kb upstream 2.0kb upstream 2000 false scaffold02229: 6581148-6583147 Cucumis sativus
Cucsa.260240 2.0kb downstream 2.0kb downstream 5283 true scaffold02229: 6583148-6588430 Cucumis sativus
Cucsa.260240 2.0kb downstream 2.0kb downstream 2000 false scaffold02229: 6586431-6588430 Cucumis sativus
Cucsa.260240 5.0kb upstream 5.0kb upstream 8283 true scaffold02229: 6578148-6586430 Cucumis sativus
Cucsa.260240 5.0kb upstream 5.0kb upstream 5000 false scaffold02229: 6578148-6583147 Cucumis sativus
Cucsa.260240 5.0kb downstream 5.0kb downstream 8283 true scaffold02229: 6583148-6591430 Cucumis sativus
Cucsa.260240 5.0kb downstream 5.0kb downstream 5000 false scaffold02229: 6586431-6591430 Cucumis sativus
Cucsa.260240 10.0kb upstream 10.0kb upstream 13283 true scaffold02229: 6573148-6586430 Cucumis sativus
Cucsa.260240 10.0kb upstream 10.0kb upstream 10000 false scaffold02229: 6573148-6583147 Cucumis sativus
Cucsa.260240 10.0kb downstream 10.0kb downstream 13283 true scaffold02229: 6583148-6596430 Cucumis sativus
Cucsa.260240 10.0kb downstream 10.0kb downstream 10000 false scaffold02229: 6586431-6596430 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301533 5265 Fabidae View MSA
124070864 5270 Rosid View MSA
123742318 5271 Pentapetalae View MSA
122794630 5272 Eudicot View MSA
122048955 5273 Angiosperm View MSA
121351194 5274 Embryophyte View MSA
123428527 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain