Gene : Cucsa.266060 C. sativus v1.0
Defline:  (1 of 1) PTHR11946//PTHR11946:SF78 - ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES Genomic Order:  47
Name:  ? Cucsa.266060 Secondary Identifier:  ? PAC:16973342
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus TRNA-CHARGING-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.266060 0.5kb upstream 0.5kb upstream 7401 true scaffold02352: 481121-488521 Cucumis sativus
Cucsa.266060 0.5kb upstream 0.5kb upstream 500 false scaffold02352: 488022-488521 Cucumis sativus
Cucsa.266060 0.5kb downstream 0.5kb downstream 7401 true scaffold02352: 480621-488021 Cucumis sativus
Cucsa.266060 0.5kb downstream 0.5kb downstream 500 false scaffold02352: 480621-481120 Cucumis sativus
Cucsa.266060 1.0kb upstream 1.0kb upstream 7901 true scaffold02352: 481121-489021 Cucumis sativus
Cucsa.266060 1.0kb upstream 1.0kb upstream 1000 false scaffold02352: 488022-489021 Cucumis sativus
Cucsa.266060 1.0kb downstream 1.0kb downstream 7901 true scaffold02352: 480121-488021 Cucumis sativus
Cucsa.266060 1.0kb downstream 1.0kb downstream 1000 false scaffold02352: 480121-481120 Cucumis sativus
Cucsa.266060 2.0kb upstream 2.0kb upstream 8901 true scaffold02352: 481121-490021 Cucumis sativus
Cucsa.266060 2.0kb upstream 2.0kb upstream 2000 false scaffold02352: 488022-490021 Cucumis sativus
Cucsa.266060 2.0kb downstream 2.0kb downstream 8901 true scaffold02352: 479121-488021 Cucumis sativus
Cucsa.266060 2.0kb downstream 2.0kb downstream 2000 false scaffold02352: 479121-481120 Cucumis sativus
Cucsa.266060 5.0kb upstream 5.0kb upstream 11901 true scaffold02352: 481121-493021 Cucumis sativus
Cucsa.266060 5.0kb upstream 5.0kb upstream 5000 false scaffold02352: 488022-493021 Cucumis sativus
Cucsa.266060 5.0kb downstream 5.0kb downstream 11901 true scaffold02352: 476121-488021 Cucumis sativus
Cucsa.266060 5.0kb downstream 5.0kb downstream 5000 false scaffold02352: 476121-481120 Cucumis sativus
Cucsa.266060 10.0kb upstream 10.0kb upstream 16901 true scaffold02352: 481121-498021 Cucumis sativus
Cucsa.266060 10.0kb upstream 10.0kb upstream 10000 false scaffold02352: 488022-498021 Cucumis sativus
Cucsa.266060 10.0kb downstream 10.0kb downstream 16901 true scaffold02352: 471121-488021 Cucumis sativus
Cucsa.266060 10.0kb downstream 10.0kb downstream 10000 false scaffold02352: 471121-481120 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300512 5265 Fabidae View MSA
124066402 5270 Rosid View MSA
123739463 5271 Pentapetalae View MSA
122793532 5272 Eudicot View MSA
122041539 5273 Angiosperm View MSA
121348816 5274 Embryophyte View MSA
123428788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain