Gene : Cucsa.273470 C. sativus v1.0
Defline:  (1 of 3) PTHR22880:SF172 - TRANSCRIPTION FACTOR GTE3, CHLOROPLASTIC-RELATED Genomic Order:  46
Name:  ? Cucsa.273470 Secondary Identifier:  ? PAC:16973829
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.273470 0.5kb upstream 0.5kb upstream 4094 true scaffold02511: 578249-582342 Cucumis sativus
Cucsa.273470 0.5kb upstream 0.5kb upstream 500 false scaffold02511: 578249-578748 Cucumis sativus
Cucsa.273470 0.5kb downstream 0.5kb downstream 4094 true scaffold02511: 578749-582842 Cucumis sativus
Cucsa.273470 0.5kb downstream 0.5kb downstream 500 false scaffold02511: 582343-582842 Cucumis sativus
Cucsa.273470 1.0kb upstream 1.0kb upstream 4594 true scaffold02511: 577749-582342 Cucumis sativus
Cucsa.273470 1.0kb upstream 1.0kb upstream 1000 false scaffold02511: 577749-578748 Cucumis sativus
Cucsa.273470 1.0kb downstream 1.0kb downstream 4594 true scaffold02511: 578749-583342 Cucumis sativus
Cucsa.273470 1.0kb downstream 1.0kb downstream 1000 false scaffold02511: 582343-583342 Cucumis sativus
Cucsa.273470 2.0kb upstream 2.0kb upstream 5594 true scaffold02511: 576749-582342 Cucumis sativus
Cucsa.273470 2.0kb upstream 2.0kb upstream 2000 false scaffold02511: 576749-578748 Cucumis sativus
Cucsa.273470 2.0kb downstream 2.0kb downstream 5594 true scaffold02511: 578749-584342 Cucumis sativus
Cucsa.273470 2.0kb downstream 2.0kb downstream 2000 false scaffold02511: 582343-584342 Cucumis sativus
Cucsa.273470 5.0kb upstream 5.0kb upstream 8594 true scaffold02511: 573749-582342 Cucumis sativus
Cucsa.273470 5.0kb upstream 5.0kb upstream 5000 false scaffold02511: 573749-578748 Cucumis sativus
Cucsa.273470 5.0kb downstream 5.0kb downstream 8594 true scaffold02511: 578749-587342 Cucumis sativus
Cucsa.273470 5.0kb downstream 5.0kb downstream 5000 false scaffold02511: 582343-587342 Cucumis sativus
Cucsa.273470 10.0kb upstream 10.0kb upstream 13594 true scaffold02511: 568749-582342 Cucumis sativus
Cucsa.273470 10.0kb upstream 10.0kb upstream 10000 false scaffold02511: 568749-578748 Cucumis sativus
Cucsa.273470 10.0kb downstream 10.0kb downstream 13594 true scaffold02511: 578749-592342 Cucumis sativus
Cucsa.273470 10.0kb downstream 10.0kb downstream 10000 false scaffold02511: 582343-592342 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122237677 5265 Fabidae View MSA
124051419 5270 Rosid View MSA
123750447 5271 Pentapetalae View MSA
122794064 5272 Eudicot View MSA
122046365 5273 Angiosperm View MSA
123429103 5275 Viridiplantae View MSA
121348953 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain