Gene : Cucsa.273420 C. sativus v1.0
Defline:  (1 of 1) 1.13.11.5 - Homogentisate 1,2-dioxygenase / Homogentisicase Genomic Order:  41
Name:  ? Cucsa.273420 Secondary Identifier:  ? PAC:16973824
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.273420 0.5kb upstream 0.5kb upstream 4397 true scaffold02511: 535965-540361 Cucumis sativus
Cucsa.273420 0.5kb upstream 0.5kb upstream 500 false scaffold02511: 535965-536464 Cucumis sativus
Cucsa.273420 0.5kb downstream 0.5kb downstream 4397 true scaffold02511: 536465-540861 Cucumis sativus
Cucsa.273420 0.5kb downstream 0.5kb downstream 500 false scaffold02511: 540362-540861 Cucumis sativus
Cucsa.273420 1.0kb upstream 1.0kb upstream 4897 true scaffold02511: 535465-540361 Cucumis sativus
Cucsa.273420 1.0kb upstream 1.0kb upstream 1000 false scaffold02511: 535465-536464 Cucumis sativus
Cucsa.273420 1.0kb downstream 1.0kb downstream 4897 true scaffold02511: 536465-541361 Cucumis sativus
Cucsa.273420 1.0kb downstream 1.0kb downstream 1000 false scaffold02511: 540362-541361 Cucumis sativus
Cucsa.273420 2.0kb upstream 2.0kb upstream 5897 true scaffold02511: 534465-540361 Cucumis sativus
Cucsa.273420 2.0kb upstream 2.0kb upstream 2000 false scaffold02511: 534465-536464 Cucumis sativus
Cucsa.273420 2.0kb downstream 2.0kb downstream 5897 true scaffold02511: 536465-542361 Cucumis sativus
Cucsa.273420 2.0kb downstream 2.0kb downstream 2000 false scaffold02511: 540362-542361 Cucumis sativus
Cucsa.273420 5.0kb upstream 5.0kb upstream 8897 true scaffold02511: 531465-540361 Cucumis sativus
Cucsa.273420 5.0kb upstream 5.0kb upstream 5000 false scaffold02511: 531465-536464 Cucumis sativus
Cucsa.273420 5.0kb downstream 5.0kb downstream 8897 true scaffold02511: 536465-545361 Cucumis sativus
Cucsa.273420 5.0kb downstream 5.0kb downstream 5000 false scaffold02511: 540362-545361 Cucumis sativus
Cucsa.273420 10.0kb upstream 10.0kb upstream 13897 true scaffold02511: 526465-540361 Cucumis sativus
Cucsa.273420 10.0kb upstream 10.0kb upstream 10000 false scaffold02511: 526465-536464 Cucumis sativus
Cucsa.273420 10.0kb downstream 10.0kb downstream 13897 true scaffold02511: 536465-550361 Cucumis sativus
Cucsa.273420 10.0kb downstream 10.0kb downstream 10000 false scaffold02511: 540362-550361 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302891 5265 Fabidae View MSA
124064618 5270 Rosid View MSA
123740810 5271 Pentapetalae View MSA
122786399 5272 Eudicot View MSA
122042428 5273 Angiosperm View MSA
121346859 5274 Embryophyte View MSA
123424235 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain