Gene : Cucsa.275200 C. sativus v1.0
Defline:  (1 of 4) 5.4.99.39 - Beta-amyrin synthase / 2,3-oxidosqualene beta-amyrin cyclase Genomic Order:  1
Name:  ? Cucsa.275200 Secondary Identifier:  ? PAC:16973953
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-5203 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.275200 0.5kb upstream 0.5kb upstream 8139 true scaffold02581: 23520-31658 Cucumis sativus
Cucsa.275200 0.5kb upstream 0.5kb upstream 500 false scaffold02581: 31159-31658 Cucumis sativus
Cucsa.275200 0.5kb downstream 0.5kb downstream 8139 true scaffold02581: 23020-31158 Cucumis sativus
Cucsa.275200 0.5kb downstream 0.5kb downstream 500 false scaffold02581: 23020-23519 Cucumis sativus
Cucsa.275200 1.0kb upstream 1.0kb upstream 8639 true scaffold02581: 23520-32158 Cucumis sativus
Cucsa.275200 1.0kb upstream 1.0kb upstream 1000 false scaffold02581: 31159-32158 Cucumis sativus
Cucsa.275200 1.0kb downstream 1.0kb downstream 8639 true scaffold02581: 22520-31158 Cucumis sativus
Cucsa.275200 1.0kb downstream 1.0kb downstream 1000 false scaffold02581: 22520-23519 Cucumis sativus
Cucsa.275200 2.0kb upstream 2.0kb upstream 9639 true scaffold02581: 23520-33158 Cucumis sativus
Cucsa.275200 2.0kb upstream 2.0kb upstream 2000 false scaffold02581: 31159-33158 Cucumis sativus
Cucsa.275200 2.0kb downstream 2.0kb downstream 9639 true scaffold02581: 21520-31158 Cucumis sativus
Cucsa.275200 2.0kb downstream 2.0kb downstream 2000 false scaffold02581: 21520-23519 Cucumis sativus
Cucsa.275200 5.0kb upstream 5.0kb upstream 12639 true scaffold02581: 23520-36158 Cucumis sativus
Cucsa.275200 5.0kb upstream 5.0kb upstream 5000 false scaffold02581: 31159-36158 Cucumis sativus
Cucsa.275200 5.0kb downstream 5.0kb downstream 12639 true scaffold02581: 18520-31158 Cucumis sativus
Cucsa.275200 5.0kb downstream 5.0kb downstream 5000 false scaffold02581: 18520-23519 Cucumis sativus
Cucsa.275200 10.0kb upstream 10.0kb upstream 17639 true scaffold02581: 23520-41158 Cucumis sativus
Cucsa.275200 10.0kb upstream 10.0kb upstream 10000 false scaffold02581: 31159-41158 Cucumis sativus
Cucsa.275200 10.0kb downstream 10.0kb downstream 17639 true scaffold02581: 13520-31158 Cucumis sativus
Cucsa.275200 10.0kb downstream 10.0kb downstream 10000 false scaffold02581: 13520-23519 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121606726 5273 Angiosperm View MSA
122237743 5265 Fabidae View MSA
123983273 5270 Rosid View MSA
123558902 5271 Pentapetalae View MSA
122593710 5272 Eudicot View MSA
120879014 5274 Embryophyte View MSA
122919894 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain