Gene : Cucsa.277280 C. sativus v1.0
Defline:  (1 of 12) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase Genomic Order:  16
Name:  ? Cucsa.277280 Secondary Identifier:  ? PAC:16974084
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-1081 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.277280 0.5kb upstream 0.5kb upstream 1944 true scaffold02601: 492593-494536 Cucumis sativus
Cucsa.277280 0.5kb upstream 0.5kb upstream 500 false scaffold02601: 494037-494536 Cucumis sativus
Cucsa.277280 0.5kb downstream 0.5kb downstream 1944 true scaffold02601: 492093-494036 Cucumis sativus
Cucsa.277280 0.5kb downstream 0.5kb downstream 500 false scaffold02601: 492093-492592 Cucumis sativus
Cucsa.277280 1.0kb upstream 1.0kb upstream 2444 true scaffold02601: 492593-495036 Cucumis sativus
Cucsa.277280 1.0kb upstream 1.0kb upstream 1000 false scaffold02601: 494037-495036 Cucumis sativus
Cucsa.277280 1.0kb downstream 1.0kb downstream 2444 true scaffold02601: 491593-494036 Cucumis sativus
Cucsa.277280 1.0kb downstream 1.0kb downstream 1000 false scaffold02601: 491593-492592 Cucumis sativus
Cucsa.277280 2.0kb upstream 2.0kb upstream 3444 true scaffold02601: 492593-496036 Cucumis sativus
Cucsa.277280 2.0kb upstream 2.0kb upstream 2000 false scaffold02601: 494037-496036 Cucumis sativus
Cucsa.277280 2.0kb downstream 2.0kb downstream 3444 true scaffold02601: 490593-494036 Cucumis sativus
Cucsa.277280 2.0kb downstream 2.0kb downstream 2000 false scaffold02601: 490593-492592 Cucumis sativus
Cucsa.277280 5.0kb upstream 5.0kb upstream 6444 true scaffold02601: 492593-499036 Cucumis sativus
Cucsa.277280 5.0kb upstream 5.0kb upstream 5000 false scaffold02601: 494037-499036 Cucumis sativus
Cucsa.277280 5.0kb downstream 5.0kb downstream 6444 true scaffold02601: 487593-494036 Cucumis sativus
Cucsa.277280 5.0kb downstream 5.0kb downstream 5000 false scaffold02601: 487593-492592 Cucumis sativus
Cucsa.277280 10.0kb upstream 10.0kb upstream 11444 true scaffold02601: 492593-504036 Cucumis sativus
Cucsa.277280 10.0kb upstream 10.0kb upstream 10000 false scaffold02601: 494037-504036 Cucumis sativus
Cucsa.277280 10.0kb downstream 10.0kb downstream 11444 true scaffold02601: 482593-494036 Cucumis sativus
Cucsa.277280 10.0kb downstream 10.0kb downstream 10000 false scaffold02601: 482593-492592 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309528 5265 Fabidae View MSA
124074380 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain