Gene : Cucsa.277780 C. sativus v1.0
Defline:  (1 of 1) PTHR11800:SF2 - DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3 Genomic Order:  21
Name:  ? Cucsa.277780 Secondary Identifier:  ? PAC:16974130
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.277780 0.5kb upstream 0.5kb upstream 8226 true scaffold02604: 378769-386994 Cucumis sativus
Cucsa.277780 0.5kb upstream 0.5kb upstream 500 false scaffold02604: 386495-386994 Cucumis sativus
Cucsa.277780 0.5kb downstream 0.5kb downstream 8226 true scaffold02604: 378269-386494 Cucumis sativus
Cucsa.277780 0.5kb downstream 0.5kb downstream 500 false scaffold02604: 378269-378768 Cucumis sativus
Cucsa.277780 1.0kb upstream 1.0kb upstream 8726 true scaffold02604: 378769-387494 Cucumis sativus
Cucsa.277780 1.0kb upstream 1.0kb upstream 1000 false scaffold02604: 386495-387494 Cucumis sativus
Cucsa.277780 1.0kb downstream 1.0kb downstream 8726 true scaffold02604: 377769-386494 Cucumis sativus
Cucsa.277780 1.0kb downstream 1.0kb downstream 1000 false scaffold02604: 377769-378768 Cucumis sativus
Cucsa.277780 2.0kb upstream 2.0kb upstream 9726 true scaffold02604: 378769-388494 Cucumis sativus
Cucsa.277780 2.0kb upstream 2.0kb upstream 2000 false scaffold02604: 386495-388494 Cucumis sativus
Cucsa.277780 2.0kb downstream 2.0kb downstream 9726 true scaffold02604: 376769-386494 Cucumis sativus
Cucsa.277780 2.0kb downstream 2.0kb downstream 2000 false scaffold02604: 376769-378768 Cucumis sativus
Cucsa.277780 5.0kb upstream 5.0kb upstream 12726 true scaffold02604: 378769-391494 Cucumis sativus
Cucsa.277780 5.0kb upstream 5.0kb upstream 5000 false scaffold02604: 386495-391494 Cucumis sativus
Cucsa.277780 5.0kb downstream 5.0kb downstream 12726 true scaffold02604: 373769-386494 Cucumis sativus
Cucsa.277780 5.0kb downstream 5.0kb downstream 5000 false scaffold02604: 373769-378768 Cucumis sativus
Cucsa.277780 10.0kb upstream 10.0kb upstream 17726 true scaffold02604: 378769-396494 Cucumis sativus
Cucsa.277780 10.0kb upstream 10.0kb upstream 10000 false scaffold02604: 386495-396494 Cucumis sativus
Cucsa.277780 10.0kb downstream 10.0kb downstream 17726 true scaffold02604: 368769-386494 Cucumis sativus
Cucsa.277780 10.0kb downstream 10.0kb downstream 10000 false scaffold02604: 368769-378768 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301418 5265 Fabidae View MSA
124066500 5270 Rosid View MSA
123743057 5271 Pentapetalae View MSA
122793148 5272 Eudicot View MSA
122045385 5273 Angiosperm View MSA
121347038 5274 Embryophyte View MSA
123424070 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain