Gene : Cucsa.279440 C. sativus v1.0
Defline:  (1 of 1) PF02992//PF13963 - Transposase family tnp2 (Transposase_21) // Transposase-associated domain (Transpos_assoc) Genomic Order:  2
Name:  ? Cucsa.279440 Secondary Identifier:  ? PAC:16974168
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.279440 0.5kb upstream 0.5kb upstream 1735 true scaffold02622: 10761-12495 Cucumis sativus
Cucsa.279440 0.5kb upstream 0.5kb upstream 500 false scaffold02622: 10761-11260 Cucumis sativus
Cucsa.279440 0.5kb downstream 0.5kb downstream 1735 true scaffold02622: 11261-12995 Cucumis sativus
Cucsa.279440 0.5kb downstream 0.5kb downstream 500 false scaffold02622: 12496-12995 Cucumis sativus
Cucsa.279440 1.0kb upstream 1.0kb upstream 2235 true scaffold02622: 10261-12495 Cucumis sativus
Cucsa.279440 1.0kb upstream 1.0kb upstream 1000 false scaffold02622: 10261-11260 Cucumis sativus
Cucsa.279440 1.0kb downstream 1.0kb downstream 2235 true scaffold02622: 11261-13495 Cucumis sativus
Cucsa.279440 1.0kb downstream 1.0kb downstream 1000 false scaffold02622: 12496-13495 Cucumis sativus
Cucsa.279440 2.0kb upstream 2.0kb upstream 3235 true scaffold02622: 9261-12495 Cucumis sativus
Cucsa.279440 2.0kb upstream 2.0kb upstream 2000 false scaffold02622: 9261-11260 Cucumis sativus
Cucsa.279440 2.0kb downstream 2.0kb downstream 3235 true scaffold02622: 11261-14495 Cucumis sativus
Cucsa.279440 2.0kb downstream 2.0kb downstream 2000 false scaffold02622: 12496-14495 Cucumis sativus
Cucsa.279440 5.0kb upstream 5.0kb upstream 6235 true scaffold02622: 6261-12495 Cucumis sativus
Cucsa.279440 5.0kb upstream 5.0kb upstream 5000 false scaffold02622: 6261-11260 Cucumis sativus
Cucsa.279440 5.0kb downstream 5.0kb downstream 6235 true scaffold02622: 11261-17495 Cucumis sativus
Cucsa.279440 5.0kb downstream 5.0kb downstream 5000 false scaffold02622: 12496-17495 Cucumis sativus
Cucsa.279440 10.0kb upstream 10.0kb upstream 11235 true scaffold02622: 1261-12495 Cucumis sativus
Cucsa.279440 10.0kb upstream 10.0kb upstream 10000 false scaffold02622: 1261-11260 Cucumis sativus
Cucsa.279440 10.0kb downstream 10.0kb downstream 11235 true scaffold02622: 11261-22495 Cucumis sativus
Cucsa.279440 10.0kb downstream 10.0kb downstream 10000 false scaffold02622: 12496-22495 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314526 5265 Fabidae View MSA
124039032 5270 Rosid View MSA
123752947 5271 Pentapetalae View MSA
122774877 5272 Eudicot View MSA
122050110 5273 Angiosperm View MSA
121351710 5274 Embryophyte View MSA
123427809 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain