Gene : Cucsa.281470 C. sativus v1.0
Defline:  (1 of 1) PTHR23416:SF56 - SERINE ACETYLTRANSFERASE 1, CHLOROPLASTIC-RELATED Genomic Order:  7
Name:  ? Cucsa.281470 Secondary Identifier:  ? PAC:16974334
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus CYSTSYN-PWY Cucumis sativus pathologic  
Csativus PWY-6936 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.281470 0.5kb upstream 0.5kb upstream 1286 true scaffold02639: 73697-74982 Cucumis sativus
Cucsa.281470 0.5kb upstream 0.5kb upstream 500 false scaffold02639: 74483-74982 Cucumis sativus
Cucsa.281470 0.5kb downstream 0.5kb downstream 1286 true scaffold02639: 73197-74482 Cucumis sativus
Cucsa.281470 0.5kb downstream 0.5kb downstream 500 false scaffold02639: 73197-73696 Cucumis sativus
Cucsa.281470 1.0kb upstream 1.0kb upstream 1786 true scaffold02639: 73697-75482 Cucumis sativus
Cucsa.281470 1.0kb upstream 1.0kb upstream 1000 false scaffold02639: 74483-75482 Cucumis sativus
Cucsa.281470 1.0kb downstream 1.0kb downstream 1786 true scaffold02639: 72697-74482 Cucumis sativus
Cucsa.281470 1.0kb downstream 1.0kb downstream 1000 false scaffold02639: 72697-73696 Cucumis sativus
Cucsa.281470 2.0kb upstream 2.0kb upstream 2786 true scaffold02639: 73697-76482 Cucumis sativus
Cucsa.281470 2.0kb upstream 2.0kb upstream 2000 false scaffold02639: 74483-76482 Cucumis sativus
Cucsa.281470 2.0kb downstream 2.0kb downstream 2786 true scaffold02639: 71697-74482 Cucumis sativus
Cucsa.281470 2.0kb downstream 2.0kb downstream 2000 false scaffold02639: 71697-73696 Cucumis sativus
Cucsa.281470 5.0kb upstream 5.0kb upstream 5786 true scaffold02639: 73697-79482 Cucumis sativus
Cucsa.281470 5.0kb upstream 5.0kb upstream 5000 false scaffold02639: 74483-79482 Cucumis sativus
Cucsa.281470 5.0kb downstream 5.0kb downstream 5786 true scaffold02639: 68697-74482 Cucumis sativus
Cucsa.281470 5.0kb downstream 5.0kb downstream 5000 false scaffold02639: 68697-73696 Cucumis sativus
Cucsa.281470 10.0kb upstream 10.0kb upstream 10786 true scaffold02639: 73697-84482 Cucumis sativus
Cucsa.281470 10.0kb upstream 10.0kb upstream 10000 false scaffold02639: 74483-84482 Cucumis sativus
Cucsa.281470 10.0kb downstream 10.0kb downstream 10786 true scaffold02639: 63697-74482 Cucumis sativus
Cucsa.281470 10.0kb downstream 10.0kb downstream 10000 false scaffold02639: 63697-73696 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300401 5265 Fabidae View MSA
124069334 5270 Rosid View MSA
123751427 5271 Pentapetalae View MSA
122788280 5272 Eudicot View MSA
122045055 5273 Angiosperm View MSA
121348374 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain