Gene : Cucsa.283540 C. sativus v1.0
Defline:  (1 of 1) PTHR31262:SF4 - RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A, CHLOROPLASTIC-RELATED Genomic Order:  101
Name:  ? Cucsa.283540 Secondary Identifier:  ? PAC:16974563
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus CALVIN-PWY Cucumis sativus pathologic  
Csativus PHOTOALL-PWY Cucumis sativus pathologic  
Csativus PWY-5723 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.283540 0.5kb upstream 0.5kb upstream 1714 true scaffold02653: 621896-623609 Cucumis sativus
Cucsa.283540 0.5kb upstream 0.5kb upstream 500 false scaffold02653: 623110-623609 Cucumis sativus
Cucsa.283540 0.5kb downstream 0.5kb downstream 1714 true scaffold02653: 621396-623109 Cucumis sativus
Cucsa.283540 0.5kb downstream 0.5kb downstream 500 false scaffold02653: 621396-621895 Cucumis sativus
Cucsa.283540 1.0kb upstream 1.0kb upstream 2214 true scaffold02653: 621896-624109 Cucumis sativus
Cucsa.283540 1.0kb upstream 1.0kb upstream 1000 false scaffold02653: 623110-624109 Cucumis sativus
Cucsa.283540 1.0kb downstream 1.0kb downstream 2214 true scaffold02653: 620896-623109 Cucumis sativus
Cucsa.283540 1.0kb downstream 1.0kb downstream 1000 false scaffold02653: 620896-621895 Cucumis sativus
Cucsa.283540 2.0kb upstream 2.0kb upstream 3214 true scaffold02653: 621896-625109 Cucumis sativus
Cucsa.283540 2.0kb upstream 2.0kb upstream 2000 false scaffold02653: 623110-625109 Cucumis sativus
Cucsa.283540 2.0kb downstream 2.0kb downstream 3214 true scaffold02653: 619896-623109 Cucumis sativus
Cucsa.283540 2.0kb downstream 2.0kb downstream 2000 false scaffold02653: 619896-621895 Cucumis sativus
Cucsa.283540 5.0kb upstream 5.0kb upstream 6214 true scaffold02653: 621896-628109 Cucumis sativus
Cucsa.283540 5.0kb upstream 5.0kb upstream 5000 false scaffold02653: 623110-628109 Cucumis sativus
Cucsa.283540 5.0kb downstream 5.0kb downstream 6214 true scaffold02653: 616896-623109 Cucumis sativus
Cucsa.283540 5.0kb downstream 5.0kb downstream 5000 false scaffold02653: 616896-621895 Cucumis sativus
Cucsa.283540 10.0kb upstream 10.0kb upstream 11214 true scaffold02653: 621896-633109 Cucumis sativus
Cucsa.283540 10.0kb upstream 10.0kb upstream 10000 false scaffold02653: 623110-633109 Cucumis sativus
Cucsa.283540 10.0kb downstream 10.0kb downstream 11214 true scaffold02653: 611896-623109 Cucumis sativus
Cucsa.283540 10.0kb downstream 10.0kb downstream 10000 false scaffold02653: 611896-621895 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314391 5265 Fabidae View MSA
124066802 5270 Rosid View MSA
123747186 5271 Pentapetalae View MSA
122796864 5272 Eudicot View MSA
122046951 5273 Angiosperm View MSA
121348432 5274 Embryophyte View MSA
123426346 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain